Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19665

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19655 and BWI76_RS19660 are separated by 15 nucleotidesBWI76_RS19660 and BWI76_RS19665 are separated by 242 nucleotidesBWI76_RS19665 and BWI76_RS19670 overlap by 73 nucleotidesBWI76_RS19670 and BWI76_RS19675 are separated by 53 nucleotides BWI76_RS19655: BWI76_RS19655 - hypothetical protein, at 4,108,074 to 4,109,231 _RS19655 BWI76_RS19660: BWI76_RS19660 - GTP cyclohydrolase I FolE, at 4,109,247 to 4,109,915 _RS19660 BWI76_RS19665: BWI76_RS19665 - hypothetical protein, at 4,110,158 to 4,110,355 _RS19665 BWI76_RS19670: BWI76_RS19670 - S-formylglutathione hydrolase, at 4,110,283 to 4,111,119 _RS19670 BWI76_RS19675: BWI76_RS19675 - hypothetical protein, at 4,111,173 to 4,111,370 _RS19675 Position (kb) 4110 4111Strain fitness (log2 ratio) -1 0 1at 4109.236 kb on - strandat 4110.289 kb on - strandat 4110.568 kb on - strand, within BWI76_RS19670at 4110.738 kb on + strand, within BWI76_RS19670at 4111.299 kb on - strand, within BWI76_RS19675

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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4,109,236 - -0.6
4,110,289 - +0.2
4,110,568 - BWI76_RS19670 0.34 -0.0
4,110,738 + BWI76_RS19670 0.54 +0.6
4,111,299 - BWI76_RS19675 0.64 -0.3

Or see this region's nucleotide sequence