Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16950 and BWI76_RS16955 are separated by 26 nucleotides BWI76_RS16955 and BWI76_RS16960 are separated by 509 nucleotides BWI76_RS16960 and BWI76_RS16965 are separated by 311 nucleotides BWI76_RS16965 and BWI76_RS16970 are separated by 64 nucleotides
BWI76_RS16950: BWI76_RS16950 - TetR family transcriptional regulator, at 3,516,175 to 3,516,813
_RS16950
BWI76_RS16955: BWI76_RS16955 - hypothetical protein, at 3,516,840 to 3,517,052
_RS16955
BWI76_RS16960: BWI76_RS16960 - pyruvate kinase, at 3,517,562 to 3,518,974
_RS16960
BWI76_RS16965: BWI76_RS16965 - murein lipoprotein, at 3,519,286 to 3,519,522
_RS16965
BWI76_RS16970: BWI76_RS16970 - murein L,D-transpeptidase, at 3,519,587 to 3,520,570
_RS16970
Position (kb)
3517
3518
3519 Strain fitness (log2 ratio)
-2
-1
0
1 at 3516.965 kb on + strand, within BWI76_RS16955 at 3517.113 kb on + strand at 3517.121 kb on - strand at 3517.895 kb on + strand, within BWI76_RS16960 at 3519.241 kb on + strand at 3519.249 kb on + strand at 3519.266 kb on - strand at 3519.268 kb on + strand at 3519.276 kb on - strand at 3519.293 kb on + strand at 3519.326 kb on + strand, within BWI76_RS16965 at 3519.481 kb on + strand, within BWI76_RS16965 at 3519.692 kb on - strand, within BWI76_RS16970 at 3519.769 kb on - strand, within BWI76_RS16970 at 3519.776 kb on - strand, within BWI76_RS16970
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C) remove 3,516,965 + BWI76_RS16955 0.59 -0.6 3,517,113 + -0.4 3,517,121 - +0.1 3,517,895 + BWI76_RS16960 0.24 +0.8 3,519,241 + -0.8 3,519,249 + -0.7 3,519,266 - +0.1 3,519,268 + -1.0 3,519,276 - -1.3 3,519,293 + -1.1 3,519,326 + BWI76_RS16965 0.17 -0.8 3,519,481 + BWI76_RS16965 0.82 -1.8 3,519,692 - BWI76_RS16970 0.11 -0.0 3,519,769 - BWI76_RS16970 0.18 +0.5 3,519,776 - BWI76_RS16970 0.19 +0.4
Or see this region's nucleotide sequence