Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13455

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13450 and BWI76_RS13455 are separated by 3 nucleotidesBWI76_RS13455 and BWI76_RS13460 are separated by 269 nucleotides BWI76_RS13450: BWI76_RS13450 - acyl-CoA thioesterase, at 2,804,221 to 2,805,477 _RS13450 BWI76_RS13455: BWI76_RS13455 - salicylaldehyde dehydrogenase, at 2,805,481 to 2,806,914 _RS13455 BWI76_RS13460: BWI76_RS13460 - ABC transporter substrate-binding protein, at 2,807,184 to 2,808,782 _RS13460 Position (kb) 2805 2806 2807Strain fitness (log2 ratio) -1 0 1at 2804.578 kb on + strand, within BWI76_RS13450at 2804.645 kb on + strand, within BWI76_RS13450at 2804.797 kb on + strand, within BWI76_RS13450at 2804.846 kb on - strand, within BWI76_RS13450at 2804.846 kb on - strand, within BWI76_RS13450at 2805.218 kb on + strandat 2805.251 kb on - strand, within BWI76_RS13450at 2805.798 kb on + strand, within BWI76_RS13455at 2806.050 kb on - strand, within BWI76_RS13455at 2806.363 kb on + strand, within BWI76_RS13455at 2806.436 kb on - strand, within BWI76_RS13455at 2806.725 kb on - strand, within BWI76_RS13455at 2806.845 kb on + strandat 2806.883 kb on + strandat 2806.896 kb on - strandat 2807.133 kb on + strandat 2807.182 kb on - strandat 2807.228 kb on + strandat 2807.321 kb on - strandat 2807.460 kb on - strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.462 kb on + strand, within BWI76_RS13460at 2807.470 kb on - strand, within BWI76_RS13460at 2807.541 kb on + strand, within BWI76_RS13460at 2807.737 kb on + strandat 2807.745 kb on - strand, within BWI76_RS13460

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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2,804,578 + BWI76_RS13450 0.28 +0.7
2,804,645 + BWI76_RS13450 0.34 -0.3
2,804,797 + BWI76_RS13450 0.46 -0.6
2,804,846 - BWI76_RS13450 0.50 +0.5
2,804,846 - BWI76_RS13450 0.50 +0.4
2,805,218 + +0.2
2,805,251 - BWI76_RS13450 0.82 +0.2
2,805,798 + BWI76_RS13455 0.22 +0.1
2,806,050 - BWI76_RS13455 0.40 +0.1
2,806,363 + BWI76_RS13455 0.62 +0.1
2,806,436 - BWI76_RS13455 0.67 +0.6
2,806,725 - BWI76_RS13455 0.87 -0.5
2,806,845 + +0.0
2,806,883 + +1.1
2,806,896 - +0.0
2,807,133 + +0.2
2,807,182 - -0.5
2,807,228 + -0.1
2,807,321 - -0.1
2,807,460 - BWI76_RS13460 0.17 -0.2
2,807,462 + BWI76_RS13460 0.17 -0.3
2,807,462 + BWI76_RS13460 0.17 -0.6
2,807,462 + BWI76_RS13460 0.17 +0.2
2,807,462 + BWI76_RS13460 0.17 +0.4
2,807,462 + BWI76_RS13460 0.17 -0.5
2,807,470 - BWI76_RS13460 0.18 +0.3
2,807,541 + BWI76_RS13460 0.22 -0.0
2,807,737 + +1.3
2,807,745 - BWI76_RS13460 0.35 +0.5

Or see this region's nucleotide sequence