Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06060

Experiment: 2-Deoxyadenosine 5-monophosphate 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06055 and BWI76_RS06060 overlap by 1 nucleotidesBWI76_RS06060 and BWI76_RS06065 are separated by 252 nucleotides BWI76_RS06055: BWI76_RS06055 - MASE1 sensor histidine kinase, at 1,272,475 to 1,274,016 _RS06055 BWI76_RS06060: BWI76_RS06060 - DNA-binding response regulator, at 1,274,016 to 1,274,645 _RS06060 BWI76_RS06065: BWI76_RS06065 - taurine ABC transporter substrate-binding protein, at 1,274,898 to 1,275,860 _RS06065 Position (kb) 1274 1275Strain fitness (log2 ratio) -1 0 1at 1273.045 kb on + strand, within BWI76_RS06055at 1273.642 kb on - strand, within BWI76_RS06055at 1273.658 kb on + strand, within BWI76_RS06055at 1273.659 kb on - strand, within BWI76_RS06055at 1273.719 kb on - strand, within BWI76_RS06055at 1273.961 kb on + strandat 1274.161 kb on - strand, within BWI76_RS06060at 1274.461 kb on - strand, within BWI76_RS06060at 1274.487 kb on - strand, within BWI76_RS06060at 1274.529 kb on + strand, within BWI76_RS06060at 1274.550 kb on - strand, within BWI76_RS06060at 1274.990 kb on - strandat 1275.225 kb on + strand, within BWI76_RS06065at 1275.266 kb on + strand, within BWI76_RS06065at 1275.302 kb on - strand, within BWI76_RS06065at 1275.326 kb on - strand, within BWI76_RS06065at 1275.355 kb on + strand, within BWI76_RS06065at 1275.462 kb on + strand, within BWI76_RS06065at 1275.507 kb on - strand, within BWI76_RS06065at 1275.512 kb on + strand, within BWI76_RS06065

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 5-monophosphate 5 mM (C)
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1,273,045 + BWI76_RS06055 0.37 -0.0
1,273,642 - BWI76_RS06055 0.76 -0.3
1,273,658 + BWI76_RS06055 0.77 +0.6
1,273,659 - BWI76_RS06055 0.77 +0.3
1,273,719 - BWI76_RS06055 0.81 -0.8
1,273,961 + +0.4
1,274,161 - BWI76_RS06060 0.23 +1.5
1,274,461 - BWI76_RS06060 0.71 +0.5
1,274,487 - BWI76_RS06060 0.75 -0.2
1,274,529 + BWI76_RS06060 0.81 +0.3
1,274,550 - BWI76_RS06060 0.85 +1.5
1,274,990 - -1.4
1,275,225 + BWI76_RS06065 0.34 +0.1
1,275,266 + BWI76_RS06065 0.38 -0.8
1,275,302 - BWI76_RS06065 0.42 -0.4
1,275,326 - BWI76_RS06065 0.44 -0.1
1,275,355 + BWI76_RS06065 0.47 +0.6
1,275,462 + BWI76_RS06065 0.59 -0.5
1,275,507 - BWI76_RS06065 0.63 +0.4
1,275,512 + BWI76_RS06065 0.64 +0.8

Or see this region's nucleotide sequence