Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11620

Experiment: malate (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with TAPS
2,576,354	-		PFLU_RS11615	0.60	+0.2
2,576,440	+		PFLU_RS11615	0.64	+1.0
2,576,441	-		PFLU_RS11615	0.64	+0.2
2,576,441	-		PFLU_RS11615	0.64	+0.6
2,576,449	+		PFLU_RS11615	0.65	-0.5
2,576,449	+		PFLU_RS11615	0.65	-1.8
2,576,449	+		PFLU_RS11615	0.65	+0.4
2,576,449	+		PFLU_RS11615	0.65	+0.3
2,576,449	+		PFLU_RS11615	0.65	+0.5
2,576,450	-		PFLU_RS11615	0.65	+0.9
2,576,450	-		PFLU_RS11615	0.65	-0.3
2,576,450	-		PFLU_RS11615	0.65	-0.2
2,576,450	-		PFLU_RS11615	0.65	-1.3
2,576,450	-		PFLU_RS11615	0.65	+0.8
2,576,450	-		PFLU_RS11615	0.65	-0.1
2,576,450	-		PFLU_RS11615	0.65	-0.1
2,576,515	+		PFLU_RS11615	0.68	+0.4
2,576,515	+		PFLU_RS11615	0.68	-0.3
2,576,515	+		PFLU_RS11615	0.68	+0.7
2,576,516	-		PFLU_RS11615	0.68	-2.3
2,576,516	-		PFLU_RS11615	0.68	-0.6
2,576,516	-		PFLU_RS11615	0.68	-1.5
2,576,542	+		PFLU_RS11615	0.69	+1.1
2,576,687	-		PFLU_RS11615	0.76	+0.3
2,576,797	-		PFLU_RS11615	0.81	-1.1
2,576,828	-		PFLU_RS11615	0.82	-0.2
2,576,828	-		PFLU_RS11615	0.82	-0.2
2,576,833	+		PFLU_RS11615	0.83	+0.5
2,576,833	+		PFLU_RS11615	0.83	+0.1
2,576,833	+		PFLU_RS11615	0.83	+0.3
2,576,833	+		PFLU_RS11615	0.83	-0.1
2,576,833	+		PFLU_RS11615	0.83	+0.4
2,576,833	+		PFLU_RS11615	0.83	+0.5
2,576,833	+		PFLU_RS11615	0.83	-0.9
2,576,833	+		PFLU_RS11615	0.83	-1.1
2,576,834	-		PFLU_RS11615	0.83	+0.4
2,576,834	-		PFLU_RS11615	0.83	-0.2
2,576,834	-		PFLU_RS11615	0.83	+0.0
2,576,834	-		PFLU_RS11615	0.83	-1.0
2,576,834	-		PFLU_RS11615	0.83	-0.3
2,576,834	-		PFLU_RS11615	0.83	+0.6
2,576,980	+		PFLU_RS11615	0.89	-0.5
2,576,980	+		PFLU_RS11615	0.89	-0.7
2,576,980	+		PFLU_RS11615	0.89	+0.3
2,576,980	+		PFLU_RS11615	0.89	-0.3
2,576,980	+		PFLU_RS11615	0.89	-0.2
2,576,981	-		PFLU_RS11615	0.90	-0.3
2,576,981	-		PFLU_RS11615	0.90	-0.3
2,576,981	-		PFLU_RS11615	0.90	-0.5
2,577,034	+				-0.1
2,577,034	+				-0.2
2,577,034	+				-0.5
2,577,035	-				+0.8
2,577,035	-				-0.6
2,577,035	-				-0.3
2,577,035	-				+0.1
2,577,035	-				+0.4
2,577,058	+				+0.4
2,577,058	+				+0.2
2,577,058	+				-1.2
2,577,058	+				-1.2
2,577,058	+				-0.4
2,577,058	+				-1.0
2,577,061	+				-0.0
2,577,061	+				-1.5
2,577,061	+				-1.2
2,577,061	+				-0.4
2,577,061	+				-0.5
2,577,061	+				+0.6
2,577,061	+				-0.2
2,577,061	+				-1.8
2,577,061	+				-2.6
2,577,061	+				+0.8
2,577,061	+				-0.3
2,577,061	+				-0.5
2,577,061	+				-0.5
2,577,062	-				+0.4
2,577,062	-				-1.3
2,577,062	-				+0.8
2,577,062	-				-2.4
2,577,062	-				-0.0
2,577,062	-				+0.1
2,577,062	-				-0.1
2,577,062	-				+1.1
2,577,148	+				-0.9
2,577,148	+				+0.3
2,577,148	+				-0.3
2,577,155	-				-0.3
2,577,193	+				+1.3
2,577,194	-				-1.7
2,577,200	+				-0.2
2,577,201	-				-0.3
2,577,201	-				-0.4
2,577,210	+				-1.7
2,577,211	-				-0.3
2,577,211	-				-0.8
2,577,269	+				-0.3
2,577,269	+				-0.8
2,577,270	-				-0.7
2,577,281	+				-0.2
2,577,281	+				-0.4
2,577,281	+				+0.3
2,577,282	-				+0.5
2,577,282	-				+0.2
2,577,282	-				+0.5
2,577,366	-				+1.4
2,577,548	+		PFLU_RS11620	0.29	-2.6
2,577,548	+		PFLU_RS11620	0.29	-1.4
2,577,548	+		PFLU_RS11620	0.29	-0.9
2,577,548	+		PFLU_RS11620	0.29	-0.5
2,577,548	+		PFLU_RS11620	0.29	-2.7
2,577,548	+		PFLU_RS11620	0.29	-2.0
2,577,548	+		PFLU_RS11620	0.29	-1.0
2,577,548	+		PFLU_RS11620	0.29	-1.2
2,577,548	+		PFLU_RS11620	0.29	-2.1
2,577,548	+		PFLU_RS11620	0.29	-0.8
2,577,549	-		PFLU_RS11620	0.29	-2.9
2,577,549	-		PFLU_RS11620	0.29	-1.2
2,577,549	-		PFLU_RS11620	0.29	-2.4
2,577,549	-		PFLU_RS11620	0.29	-2.7
2,577,549	-		PFLU_RS11620	0.29	-1.9
2,577,549	-		PFLU_RS11620	0.29	-4.0
2,577,549	-		PFLU_RS11620	0.29	-1.7
2,577,549	-		PFLU_RS11620	0.29	+0.1
2,577,549	-		PFLU_RS11620	0.29	-1.0
2,577,549	-		PFLU_RS11620	0.29	-3.3
2,577,549	-		PFLU_RS11620	0.29	-1.1
2,577,549	-		PFLU_RS11620	0.29	-1.1
2,577,549	-		PFLU_RS11620	0.29	-1.0
2,577,549	-		PFLU_RS11620	0.29	-0.5
2,577,550	+		PFLU_RS11620	0.30	-1.7
2,577,550	+		PFLU_RS11620	0.30	-1.8
2,577,550	+		PFLU_RS11620	0.30	-3.3
2,577,550	+		PFLU_RS11620	0.30	+0.2
2,577,550	+		PFLU_RS11620	0.30	-1.9
2,577,550	+		PFLU_RS11620	0.30	-0.3
2,577,550	+		PFLU_RS11620	0.30	-0.3
2,577,550	+		PFLU_RS11620	0.30	-0.6
2,577,550	+		PFLU_RS11620	0.30	-1.2
2,577,550	+		PFLU_RS11620	0.30	-2.7
2,577,550	+		PFLU_RS11620	0.30	-1.2
2,577,550	+		PFLU_RS11620	0.30	-2.7
2,577,550	+		PFLU_RS11620	0.30	-1.8
2,577,550	+		PFLU_RS11620	0.30	-0.6
2,577,550	+		PFLU_RS11620	0.30	-0.8
2,577,550	+		PFLU_RS11620	0.30	-0.7
2,577,550	+		PFLU_RS11620	0.30	-2.1
2,577,550	+		PFLU_RS11620	0.30	-0.6
2,577,550	+		PFLU_RS11620	0.30	-0.4
2,577,550	+		PFLU_RS11620	0.30	-1.9
2,577,551	-		PFLU_RS11620	0.30	-2.0
2,577,551	-		PFLU_RS11620	0.30	+0.0
2,577,551	-		PFLU_RS11620	0.30	-1.9
2,577,551	-		PFLU_RS11620	0.30	-1.8
2,577,551	-		PFLU_RS11620	0.30	-0.7
2,577,551	-		PFLU_RS11620	0.30	+1.0
2,577,551	-		PFLU_RS11620	0.30	-1.9
2,577,551	-		PFLU_RS11620	0.30	-2.2
2,577,551	-		PFLU_RS11620	0.30	+0.8
2,577,551	-		PFLU_RS11620	0.30	-0.5
2,577,551	-		PFLU_RS11620	0.30	-2.1
2,577,551	-		PFLU_RS11620	0.30	-2.5
2,577,551	-		PFLU_RS11620	0.30	+0.1
2,577,551	-		PFLU_RS11620	0.30	-0.7
2,577,551	-		PFLU_RS11620	0.30	-1.7
2,577,551	-		PFLU_RS11620	0.30	-1.1
2,577,551	-		PFLU_RS11620	0.30	-0.7
2,577,551	-		PFLU_RS11620	0.30	-2.3
2,577,551	-		PFLU_RS11620	0.30	-0.7
2,577,692	+		PFLU_RS11620	0.49	-2.4
2,577,749	+		PFLU_RS11620	0.57	+0.5
2,577,750	-		PFLU_RS11620	0.57	-0.5
2,577,862	+		PFLU_RS11620	0.73	-2.7
2,577,862	+		PFLU_RS11620	0.73	-1.5
2,577,863	-		PFLU_RS11620	0.73	-1.5
2,577,863	-		PFLU_RS11620	0.73	-0.3
2,577,925	+		PFLU_RS11620	0.81	-0.2
2,577,925	+		PFLU_RS11620	0.81	-0.4
2,577,925	+		PFLU_RS11620	0.81	-0.1
2,577,926	-		PFLU_RS11620	0.82	-0.9
2,577,926	-		PFLU_RS11620	0.82	-1.2
2,577,926	-		PFLU_RS11620	0.82	-1.3
2,577,926	-		PFLU_RS11620	0.82	-1.1
2,577,926	-		PFLU_RS11620	0.82	-4.1
2,578,081	-				+0.3
2,578,096	+				+0.1
2,578,096	+				+1.1
2,578,096	+				+0.7
2,578,096	+				+0.8
2,578,096	+				+0.2
2,578,096	+				-0.6
2,578,096	+				+0.1
2,578,096	+				-0.6
2,578,096	+				+0.1
2,578,096	+				-1.4
2,578,096	+				-0.6
2,578,097	-				+0.1
2,578,097	-				+0.5
2,578,097	-				-0.1
2,578,097	-				+1.1
2,578,097	-				+0.7
2,578,097	-				+1.5
2,578,097	-				+0.5
2,578,097	-				+0.9
2,578,097	-				+0.5
2,578,097	-				-1.0
2,578,097	-				+0.4
2,578,108	+				+1.7
2,578,109	-				+0.8
2,578,197	-				+0.5
2,578,197	-				+0.1
2,578,198	+				+0.2
2,578,198	+				-2.4
2,578,198	+				+0.8
2,578,198	+				+0.1
2,578,199	-				-0.4
2,578,199	-				-0.5
2,578,199	-				-1.0
2,578,199	-				-1.9
2,578,199	-				-0.7
2,578,199	-				+0.1
2,578,199	-				+1.7
2,578,199	-				-0.1
2,578,436	+		PFLU_RS11625	0.19	-1.8
2,578,437	-		PFLU_RS11625	0.19	-0.2
2,578,443	+		PFLU_RS11625	0.19	-1.0
2,578,585	+		PFLU_RS11625	0.28	-0.8
2,578,585	+		PFLU_RS11625	0.28	-0.7
2,578,585	+		PFLU_RS11625	0.28	+0.5
2,578,585	+		PFLU_RS11625	0.28	+0.3
2,578,585	+		PFLU_RS11625	0.28	-0.9
2,578,585	+		PFLU_RS11625	0.28	-2.2
2,578,585	+		PFLU_RS11625	0.28	-0.1
2,578,585	+		PFLU_RS11625	0.28	+0.6
2,578,585	+		PFLU_RS11625	0.28	-0.3
2,578,585	+		PFLU_RS11625	0.28	-0.2
2,578,585	+		PFLU_RS11625	0.28	+0.1
2,578,585	+		PFLU_RS11625	0.28	+0.7
2,578,586	-		PFLU_RS11625	0.28	+0.4
2,578,586	-		PFLU_RS11625	0.28	-0.1
2,578,586	-		PFLU_RS11625	0.28	+0.1
2,578,586	-		PFLU_RS11625	0.28	-1.3
2,578,586	-		PFLU_RS11625	0.28	+0.2
2,578,586	-		PFLU_RS11625	0.28	+0.1
2,578,586	-		PFLU_RS11625	0.28	+0.1
2,578,586	-		PFLU_RS11625	0.28	+1.4
2,578,586	-		PFLU_RS11625	0.28	-1.0
2,578,586	-		PFLU_RS11625	0.28	+0.7
2,578,586	-		PFLU_RS11625	0.28	-0.7
2,578,586	-		PFLU_RS11625	0.28	+0.1
2,578,586	-		PFLU_RS11625	0.28	-1.0
2,578,586	-		PFLU_RS11625	0.28	+0.2
2,578,586	-		PFLU_RS11625	0.28	+0.0
2,578,759	+		PFLU_RS11625	0.38	-0.9
2,578,760	-		PFLU_RS11625	0.38	-0.2
2,578,879	+		PFLU_RS11625	0.44	+0.3
2,578,879	+		PFLU_RS11625	0.44	-1.4
2,578,882	+		PFLU_RS11625	0.45	-0.5
2,578,882	+		PFLU_RS11625	0.45	+0.9
2,578,882	+		PFLU_RS11625	0.45	-1.2
2,578,882	+		PFLU_RS11625	0.45	-0.8
2,578,882	+		PFLU_RS11625	0.45	-0.9
2,578,882	+		PFLU_RS11625	0.45	-0.5
2,578,882	+		PFLU_RS11625	0.45	-0.8
2,578,882	+		PFLU_RS11625	0.45	+0.4
2,578,882	+		PFLU_RS11625	0.45	+0.5
2,578,883	-		PFLU_RS11625	0.45	-0.3
2,578,883	-		PFLU_RS11625	0.45	-0.2
2,578,883	-		PFLU_RS11625	0.45	-0.3
2,578,883	-		PFLU_RS11625	0.45	-0.1