Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07165

Experiment: malate (C) and Ammonium chloride (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	malate (C) and Ammonium chloride (N); with TAPS
1,599,686	+				-0.1
1,599,686	+				-1.3
1,599,686	+				+0.7
1,599,687	-				+0.1
1,599,703	+				+1.8
1,599,703	+				-0.1
1,599,703	+				+0.3
1,599,703	+				-0.5
1,599,704	-				-0.3
1,599,704	-				+0.2
1,599,766	+				-0.9
1,599,766	+				-0.1
1,599,766	+				+0.3
1,599,766	+				-0.3
1,599,766	+				+0.3
1,599,766	+				-1.2
1,599,767	-				-0.5
1,599,767	-				-1.1
1,599,767	-				-2.4
1,599,767	-				-1.9
1,599,788	-				+0.3
1,599,807	-				-0.5
1,599,862	-				-0.5
1,599,862	-				+0.3
1,599,905	+				-2.0
1,599,906	-				-0.5
1,599,906	-				+0.2
1,599,906	-				-0.5
1,599,906	-				-1.0
1,600,046	+		PFLU_RS07160	0.20	-0.4
1,600,046	+		PFLU_RS07160	0.20	-0.1
1,600,047	-		PFLU_RS07160	0.20	-1.2
1,600,047	-		PFLU_RS07160	0.20	-0.2
1,600,205	+		PFLU_RS07160	0.43	-0.8
1,600,205	+		PFLU_RS07160	0.43	+0.4
1,600,206	-		PFLU_RS07160	0.43	+0.2
1,600,311	+		PFLU_RS07160	0.59	+0.6
1,600,311	+		PFLU_RS07160	0.59	-0.3
1,600,311	+		PFLU_RS07160	0.59	+0.9
1,600,311	+		PFLU_RS07160	0.59	-1.6
1,600,311	+		PFLU_RS07160	0.59	+0.8
1,600,311	+		PFLU_RS07160	0.59	+0.4
1,600,311	+		PFLU_RS07160	0.59	-0.1
1,600,311	+		PFLU_RS07160	0.59	-0.5
1,600,311	+		PFLU_RS07160	0.59	-0.6
1,600,311	+		PFLU_RS07160	0.59	+0.9
1,600,311	+		PFLU_RS07160	0.59	-0.7
1,600,311	+		PFLU_RS07160	0.59	+0.7
1,600,311	+		PFLU_RS07160	0.59	+1.1
1,600,311	+		PFLU_RS07160	0.59	+0.5
1,600,311	+		PFLU_RS07160	0.59	-0.4
1,600,311	+		PFLU_RS07160	0.59	+1.3
1,600,311	+		PFLU_RS07160	0.59	-0.5
1,600,311	+		PFLU_RS07160	0.59	+0.4
1,600,311	+		PFLU_RS07160	0.59	-0.5
1,600,311	+		PFLU_RS07160	0.59	+0.1
1,600,311	+		PFLU_RS07160	0.59	-0.7
1,600,311	+		PFLU_RS07160	0.59	-1.0
1,600,311	+		PFLU_RS07160	0.59	-0.6
1,600,311	+		PFLU_RS07160	0.59	-1.1
1,600,311	+		PFLU_RS07160	0.59	+1.7
1,600,311	+		PFLU_RS07160	0.59	-1.6
1,600,312	-		PFLU_RS07160	0.59	-0.0
1,600,312	-		PFLU_RS07160	0.59	+0.1
1,600,312	-		PFLU_RS07160	0.59	-1.1
1,600,312	-		PFLU_RS07160	0.59	-0.3
1,600,312	-		PFLU_RS07160	0.59	+0.3
1,600,312	-		PFLU_RS07160	0.59	+0.9
1,600,312	-		PFLU_RS07160	0.59	-0.8
1,600,312	-		PFLU_RS07160	0.59	+1.2
1,600,312	-		PFLU_RS07160	0.59	+0.9
1,600,312	-		PFLU_RS07160	0.59	-0.9
1,600,312	-		PFLU_RS07160	0.59	-1.5
1,600,312	-		PFLU_RS07160	0.59	-0.8
1,600,312	-		PFLU_RS07160	0.59	-0.1
1,600,312	-		PFLU_RS07160	0.59	-0.3
1,600,312	-		PFLU_RS07160	0.59	-1.4
1,600,312	-		PFLU_RS07160	0.59	+0.1
1,600,312	-		PFLU_RS07160	0.59	-0.1
1,600,312	-		PFLU_RS07160	0.59	-0.5
1,600,312	-		PFLU_RS07160	0.59	+0.5
1,600,312	-		PFLU_RS07160	0.59	+1.9
1,600,312	-		PFLU_RS07160	0.59	-0.1
1,600,312	-		PFLU_RS07160	0.59	+0.6
1,600,312	-		PFLU_RS07160	0.59	+1.5
1,600,312	-		PFLU_RS07160	0.59	-0.9
1,600,312	-		PFLU_RS07160	0.59	+0.0
1,600,312	-		PFLU_RS07160	0.59	-0.7
1,600,313	+		PFLU_RS07160	0.59	+0.5
1,600,313	+		PFLU_RS07160	0.59	-0.5
1,600,313	+		PFLU_RS07160	0.59	+0.4
1,600,313	+		PFLU_RS07160	0.59	+0.3
1,600,313	+		PFLU_RS07160	0.59	-0.4
1,600,313	+		PFLU_RS07160	0.59	+0.4
1,600,313	+		PFLU_RS07160	0.59	+0.6
1,600,313	+		PFLU_RS07160	0.59	-0.7
1,600,313	+		PFLU_RS07160	0.59	-0.4
1,600,313	+		PFLU_RS07160	0.59	-1.8
1,600,313	+		PFLU_RS07160	0.59	-0.1
1,600,313	+		PFLU_RS07160	0.59	-1.5
1,600,313	+		PFLU_RS07160	0.59	-0.4
1,600,313	+		PFLU_RS07160	0.59	+0.8
1,600,313	+		PFLU_RS07160	0.59	+0.3
1,600,313	+		PFLU_RS07160	0.59	-0.9
1,600,313	+		PFLU_RS07160	0.59	+0.5
1,600,313	+		PFLU_RS07160	0.59	-0.7
1,600,313	+		PFLU_RS07160	0.59	-0.5
1,600,313	+		PFLU_RS07160	0.59	+0.7
1,600,313	+		PFLU_RS07160	0.59	-1.0
1,600,313	+		PFLU_RS07160	0.59	+0.1
1,600,313	+		PFLU_RS07160	0.59	-0.2
1,600,313	+		PFLU_RS07160	0.59	-1.8
1,600,313	+		PFLU_RS07160	0.59	+0.1
1,600,313	+		PFLU_RS07160	0.59	+0.3
1,600,313	+		PFLU_RS07160	0.59	-0.5
1,600,313	+		PFLU_RS07160	0.59	-0.2
1,600,313	+		PFLU_RS07160	0.59	-0.1
1,600,314	-		PFLU_RS07160	0.60	+0.4
1,600,314	-		PFLU_RS07160	0.60	-0.6
1,600,314	-		PFLU_RS07160	0.60	-1.6
1,600,314	-		PFLU_RS07160	0.60	-0.3
1,600,314	-		PFLU_RS07160	0.60	+0.4
1,600,314	-		PFLU_RS07160	0.60	+1.2
1,600,314	-		PFLU_RS07160	0.60	+0.4
1,600,314	-		PFLU_RS07160	0.60	-1.0
1,600,314	-		PFLU_RS07160	0.60	-0.3
1,600,314	-		PFLU_RS07160	0.60	+0.7
1,600,314	-		PFLU_RS07160	0.60	-0.0
1,600,314	-		PFLU_RS07160	0.60	+0.3
1,600,314	-		PFLU_RS07160	0.60	-0.5
1,600,314	-		PFLU_RS07160	0.60	+0.0
1,600,314	-		PFLU_RS07160	0.60	-1.2
1,600,314	-		PFLU_RS07160	0.60	+1.2
1,600,314	-		PFLU_RS07160	0.60	+0.6
1,600,337	-		PFLU_RS07160	0.63	+0.2
1,600,423	+		PFLU_RS07160	0.76	-0.0
1,600,423	+		PFLU_RS07160	0.76	-0.6
1,600,423	+		PFLU_RS07160	0.76	-0.3
1,600,424	-		PFLU_RS07160	0.76	-0.8
1,600,424	-		PFLU_RS07160	0.76	+0.5
1,600,424	-		PFLU_RS07160	0.76	-1.6
1,600,424	-		PFLU_RS07160	0.76	+0.5
1,600,446	+		PFLU_RS07160	0.79	-1.0
1,600,447	-		PFLU_RS07160	0.79	+0.4
1,600,447	-		PFLU_RS07160	0.79	-0.9
1,600,447	-		PFLU_RS07160	0.79	+0.8
1,600,490	+		PFLU_RS07160	0.86	+0.4
1,600,490	+		PFLU_RS07160	0.86	-0.0
1,600,490	+		PFLU_RS07160	0.86	-0.1
1,600,490	+		PFLU_RS07160	0.86	-1.0
1,600,490	+		PFLU_RS07160	0.86	+0.3
1,600,490	+		PFLU_RS07160	0.86	+0.8
1,600,490	+		PFLU_RS07160	0.86	-0.8
1,600,490	+		PFLU_RS07160	0.86	+0.6
1,600,490	+		PFLU_RS07160	0.86	-0.0
1,600,491	-		PFLU_RS07160	0.86	+1.4
1,600,491	-		PFLU_RS07160	0.86	+0.7
1,600,491	-		PFLU_RS07160	0.86	+3.8
1,600,491	-		PFLU_RS07160	0.86	-1.5
1,600,491	-		PFLU_RS07160	0.86	+0.1
1,600,491	-		PFLU_RS07160	0.86	-1.8
1,600,491	-		PFLU_RS07160	0.86	+0.5
1,600,491	-		PFLU_RS07160	0.86	-1.4
1,600,507	+		PFLU_RS07160	0.88	+0.2
1,600,507	+		PFLU_RS07160	0.88	-0.3
1,600,507	+		PFLU_RS07160	0.88	-0.3
1,600,507	+		PFLU_RS07160	0.88	-0.6
1,600,507	+		PFLU_RS07160	0.88	-1.5
1,600,508	-		PFLU_RS07160	0.88	+0.4
1,600,508	-		PFLU_RS07160	0.88	+0.0
1,600,560	-				-0.7
1,600,583	+				-1.7
1,600,583	+				-1.2
1,600,583	+				-1.3
1,600,583	+				-0.2
1,600,584	-				-2.7
1,600,584	-				-0.2
1,600,584	-				-0.1
1,600,584	-				-1.0
1,600,669	-				+0.3
1,600,709	+				-2.5
1,600,709	+				-0.8
1,600,710	-				-0.8
1,600,730	+		PFLU_RS07165	0.11	+0.3
1,600,731	-		PFLU_RS07165	0.11	-0.5
1,600,785	+		PFLU_RS07165	0.15	-2.1
1,600,785	+		PFLU_RS07165	0.15	-0.8
1,600,785	+		PFLU_RS07165	0.15	-1.5
1,600,785	+		PFLU_RS07165	0.15	+0.2
1,600,785	+		PFLU_RS07165	0.15	-2.6
1,600,785	+		PFLU_RS07165	0.15	-1.7
1,600,785	+		PFLU_RS07165	0.15	+0.3
1,600,785	+		PFLU_RS07165	0.15	-0.2
1,600,785	+		PFLU_RS07165	0.15	-2.8
1,600,786	-		PFLU_RS07165	0.15	-1.0
1,600,786	-		PFLU_RS07165	0.15	-1.3
1,600,786	-		PFLU_RS07165	0.15	-2.7
1,600,786	-		PFLU_RS07165	0.15	-0.1
1,600,786	-		PFLU_RS07165	0.15	-0.3
1,600,786	-		PFLU_RS07165	0.15	-1.5
1,600,786	-		PFLU_RS07165	0.15	-0.4
1,600,786	-		PFLU_RS07165	0.15	-0.4
1,600,786	-		PFLU_RS07165	0.15	-1.3
1,600,786	-		PFLU_RS07165	0.15	-1.4
1,600,786	-		PFLU_RS07165	0.15	-3.4
1,600,810	-		PFLU_RS07165	0.17	+0.2
1,600,826	+		PFLU_RS07165	0.18	+0.3
1,600,826	+		PFLU_RS07165	0.18	-0.4
1,600,826	+		PFLU_RS07165	0.18	-1.7
1,600,830	+		PFLU_RS07165	0.18	-1.0
1,600,830	+		PFLU_RS07165	0.18	-1.8
1,600,830	+		PFLU_RS07165	0.18	-1.0
1,600,830	+		PFLU_RS07165	0.18	-2.8
1,600,830	+		PFLU_RS07165	0.18	-1.6
1,600,830	+		PFLU_RS07165	0.18	-2.4
1,600,830	+		PFLU_RS07165	0.18	-0.1
1,600,830	+		PFLU_RS07165	0.18	-1.6
1,600,830	+		PFLU_RS07165	0.18	-1.7
1,600,830	+		PFLU_RS07165	0.18	-2.3
1,600,830	+		PFLU_RS07165	0.18	-1.4
1,600,830	+		PFLU_RS07165	0.18	-1.6
1,600,830	+		PFLU_RS07165	0.18	-1.3
1,600,830	+		PFLU_RS07165	0.18	-3.2
1,600,830	+		PFLU_RS07165	0.18	-0.7
1,600,830	+		PFLU_RS07165	0.18	-2.4
1,600,831	-		PFLU_RS07165	0.18	+0.0
1,600,831	-		PFLU_RS07165	0.18	-0.3
1,600,831	-		PFLU_RS07165	0.18	+0.8
1,600,831	-		PFLU_RS07165	0.18	-0.3
1,600,831	-		PFLU_RS07165	0.18	-1.8
1,600,831	-		PFLU_RS07165	0.18	-1.2
1,600,831	-		PFLU_RS07165	0.18	-0.8
1,600,831	-		PFLU_RS07165	0.18	+0.3
1,600,831	-		PFLU_RS07165	0.18	-0.1
1,600,831	-		PFLU_RS07165	0.18	-0.1
1,600,831	-		PFLU_RS07165	0.18	-0.7
1,600,831	-		PFLU_RS07165	0.18	-1.4
1,600,831	-		PFLU_RS07165	0.18	-0.1
1,600,831	-		PFLU_RS07165	0.18	+0.2
1,600,833	+		PFLU_RS07165	0.18	-0.4
1,600,833	+		PFLU_RS07165	0.18	-1.3
1,600,834	-		PFLU_RS07165	0.18	-1.6
1,600,834	-		PFLU_RS07165	0.18	-0.7
1,600,834	-		PFLU_RS07165	0.18	-0.4
1,600,834	-		PFLU_RS07165	0.18	-0.7
1,600,901	+		PFLU_RS07165	0.23	-1.2
1,600,920	+		PFLU_RS07165	0.25	-1.4
1,600,941	+		PFLU_RS07165	0.26	-1.0
1,600,941	+		PFLU_RS07165	0.26	-1.1
1,600,941	+		PFLU_RS07165	0.26	+0.9
1,600,942	-		PFLU_RS07165	0.26	+1.4
1,600,942	-		PFLU_RS07165	0.26	+0.1
1,600,942	-		PFLU_RS07165	0.26	-0.7
1,600,942	-		PFLU_RS07165	0.26	-1.9
1,600,942	-		PFLU_RS07165	0.26	-1.1
1,600,942	-		PFLU_RS07165	0.26	-0.5
1,600,953	+		PFLU_RS07165	0.27	-0.2
1,600,953	+		PFLU_RS07165	0.27	-0.9
1,600,953	+		PFLU_RS07165	0.27	+0.6
1,600,953	+		PFLU_RS07165	0.27	-2.4
1,600,953	+		PFLU_RS07165	0.27	-1.6
1,600,953	+		PFLU_RS07165	0.27	-1.5
1,600,953	+		PFLU_RS07165	0.27	+0.2
1,600,953	+		PFLU_RS07165	0.27	-2.3
1,600,953	+		PFLU_RS07165	0.27	-0.2
1,600,953	+		PFLU_RS07165	0.27	+0.6
1,600,953	+		PFLU_RS07165	0.27	-0.6
1,600,953	+		PFLU_RS07165	0.27	-2.3
1,600,953	+		PFLU_RS07165	0.27	-1.0
1,600,953	+		PFLU_RS07165	0.27	-0.2
1,600,954	-		PFLU_RS07165	0.27	+0.8
1,600,954	-		PFLU_RS07165	0.27	-0.5
1,600,954	-		PFLU_RS07165	0.27	+0.4
1,600,954	-		PFLU_RS07165	0.27	-0.2
1,600,954	-		PFLU_RS07165	0.27	-0.5
1,600,954	-		PFLU_RS07165	0.27	+0.2
1,600,954	-		PFLU_RS07165	0.27	-1.1
1,600,954	-		PFLU_RS07165	0.27	-1.1
1,600,954	-		PFLU_RS07165	0.27	-0.8
1,600,954	-		PFLU_RS07165	0.27	-0.9
1,600,954	-		PFLU_RS07165	0.27	-0.6
1,600,954	-		PFLU_RS07165	0.27	-0.6
1,600,954	-		PFLU_RS07165	0.27	-0.6
1,600,954	-		PFLU_RS07165	0.27	-0.1
1,600,954	-		PFLU_RS07165	0.27	-1.3
1,600,954	-		PFLU_RS07165	0.27	-0.7
1,601,029	+		PFLU_RS07165	0.33	-2.0
1,601,029	+		PFLU_RS07165	0.33	+0.3
1,601,029	+		PFLU_RS07165	0.33	-1.5
1,601,029	+		PFLU_RS07165	0.33	-1.1
1,601,030	-		PFLU_RS07165	0.33	-1.6
1,601,030	-		PFLU_RS07165	0.33	-2.2
1,601,030	-		PFLU_RS07165	0.33	-1.1
1,601,030	-		PFLU_RS07165	0.33	-1.4
1,601,030	-		PFLU_RS07165	0.33	-1.9
1,601,030	-		PFLU_RS07165	0.33	-0.2
1,601,129	-		PFLU_RS07165	0.40	-1.6
1,601,321	+		PFLU_RS07165	0.54	-1.7
1,601,321	+		PFLU_RS07165	0.54	-0.5
1,601,321	+		PFLU_RS07165	0.54	-1.0
1,601,322	-		PFLU_RS07165	0.54	-1.5
1,601,322	-		PFLU_RS07165	0.54	-0.4
1,601,322	-		PFLU_RS07165	0.54	+1.7
1,601,322	-		PFLU_RS07165	0.54	-1.3
1,601,536	+		PFLU_RS07165	0.69	-1.1
1,601,536	+		PFLU_RS07165	0.69	-1.2
1,601,536	+		PFLU_RS07165	0.69	-1.4
1,601,537	-		PFLU_RS07165	0.69	-2.2
1,601,537	-		PFLU_RS07165	0.69	-1.1
1,601,951	+				+0.0
1,601,968	+				+0.3
1,601,968	+				-1.1
1,601,968	+				+0.2
1,601,968	+				+0.2
1,601,968	+				-0.3
1,601,968	+				-1.1
1,601,968	+				-1.7
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1,602,101	-		PFLU_RS07170	0.17	-0.4
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1,602,101	-		PFLU_RS07170	0.17	+0.5
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1,602,130	+		PFLU_RS07170	0.20	-0.2
1,602,130	+		PFLU_RS07170	0.20	-0.0
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1,602,166	+		PFLU_RS07170	0.25	-0.7
1,602,167	-		PFLU_RS07170	0.25	-0.4
1,602,167	-		PFLU_RS07170	0.25	-0.6
1,602,282	+		PFLU_RS07170	0.39	-0.2
1,602,282	+		PFLU_RS07170	0.39	+0.4
1,602,282	+		PFLU_RS07170	0.39	-0.4
1,602,282	+		PFLU_RS07170	0.39	+0.5
1,602,283	-		PFLU_RS07170	0.39	-1.1
1,602,283	-		PFLU_RS07170	0.39	-0.8
1,602,283	-		PFLU_RS07170	0.39	-0.6
1,602,289	+		PFLU_RS07170	0.40	+0.5
1,602,290	-		PFLU_RS07170	0.40	-0.3
1,602,290	-		PFLU_RS07170	0.40	-1.1
1,602,304	+		PFLU_RS07170	0.41	-1.0
1,602,304	+		PFLU_RS07170	0.41	-0.7
1,602,304	+		PFLU_RS07170	0.41	-0.2
1,602,304	+		PFLU_RS07170	0.41	-0.0
1,602,304	+		PFLU_RS07170	0.41	-0.7
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1,602,305	-		PFLU_RS07170	0.41	+0.2
1,602,305	-		PFLU_RS07170	0.41	+1.3
1,602,305	-		PFLU_RS07170	0.41	+0.3
1,602,305	-		PFLU_RS07170	0.41	+0.2
1,602,305	-		PFLU_RS07170	0.41	+1.0
1,602,305	-		PFLU_RS07170	0.41	+0.5
1,602,305	-		PFLU_RS07170	0.41	-0.9
1,602,305	-		PFLU_RS07170	0.41	+1.6
1,602,377	+		PFLU_RS07170	0.50	-1.7
1,602,398	-		PFLU_RS07170	0.53	-1.3
1,602,398	-		PFLU_RS07170	0.53	-0.1
1,602,398	-		PFLU_RS07170	0.53	-0.5
1,602,509	+		PFLU_RS07170	0.66	+0.0
1,602,509	+		PFLU_RS07170	0.66	+0.1
1,602,509	+		PFLU_RS07170	0.66	+0.1
1,602,509	+		PFLU_RS07170	0.66	+1.3
1,602,509	+		PFLU_RS07170	0.66	+0.2
1,602,509	+		PFLU_RS07170	0.66	+0.0
1,602,509	+		PFLU_RS07170	0.66	+0.1
1,602,509	+		PFLU_RS07170	0.66	-0.7
1,602,510	-		PFLU_RS07170	0.66	+0.2
1,602,510	-		PFLU_RS07170	0.66	-0.8
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1,602,510	-		PFLU_RS07170	0.66	+0.4
1,602,510	-		PFLU_RS07170	0.66	+1.9
1,602,510	-		PFLU_RS07170	0.66	+1.3
1,602,510	-		PFLU_RS07170	0.66	+0.6
1,602,517	+		PFLU_RS07170	0.67	-0.8
1,602,517	+		PFLU_RS07170	0.67	-0.7
1,602,517	+		PFLU_RS07170	0.67	+1.1
1,602,517	+		PFLU_RS07170	0.67	+0.0
1,602,517	+		PFLU_RS07170	0.67	-0.0
1,602,517	+		PFLU_RS07170	0.67	-1.6
1,602,517	+		PFLU_RS07170	0.67	-0.3
1,602,517	+		PFLU_RS07170	0.67	+0.0
1,602,517	+		PFLU_RS07170	0.67	-0.5
1,602,518	-		PFLU_RS07170	0.67	-0.1
1,602,518	-		PFLU_RS07170	0.67	+1.9
1,602,518	-		PFLU_RS07170	0.67	-1.0
1,602,518	-		PFLU_RS07170	0.67	+0.5
1,602,518	-		PFLU_RS07170	0.67	-1.2
1,602,518	-		PFLU_RS07170	0.67	+0.3
1,602,518	-		PFLU_RS07170	0.67	+0.4
1,602,518	-		PFLU_RS07170	0.67	+1.2
1,602,518	-		PFLU_RS07170	0.67	-0.5
1,602,518	-		PFLU_RS07170	0.67	-1.4
1,602,518	-		PFLU_RS07170	0.67	-1.7
1,602,518	-		PFLU_RS07170	0.67	+0.1
1,602,518	-		PFLU_RS07170	0.67	+0.5
1,602,518	-		PFLU_RS07170	0.67	-2.5
1,602,518	-		PFLU_RS07170	0.67	-0.2
1,602,750	+				+0.3
1,602,750	+				-0.2
1,602,796	+				-0.7
1,602,796	+				-0.7
1,602,797	-				+0.5
1,602,797	-				-0.3
1,602,824	-				-0.2
1,602,856	+				+0.9
1,602,856	+				+0.5
1,602,857	-				-0.5
1,602,857	-				-0.8