Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26830 and BWI76_RS26835 are separated by 11 nucleotides BWI76_RS26835 and BWI76_RS26840 are separated by 2 nucleotides
BWI76_RS26830: BWI76_RS26830 - endoglucanase, at 5,561,376 to 5,562,380
_RS26830
BWI76_RS26835: BWI76_RS26835 - hypothetical protein, at 5,562,392 to 5,562,865
_RS26835
BWI76_RS26840: BWI76_RS26840 - cellulose synthase, at 5,562,868 to 5,566,920
_RS26840
Position (kb)
5562
5563 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5561.398 kb on + strand at 5561.477 kb on + strand, within BWI76_RS26830 at 5561.477 kb on + strand, within BWI76_RS26830 at 5561.544 kb on - strand, within BWI76_RS26830 at 5561.772 kb on + strand, within BWI76_RS26830 at 5561.829 kb on + strand, within BWI76_RS26830 at 5561.860 kb on + strand, within BWI76_RS26830 at 5561.868 kb on - strand, within BWI76_RS26830 at 5561.876 kb on - strand, within BWI76_RS26830 at 5562.152 kb on + strand, within BWI76_RS26830 at 5562.160 kb on - strand, within BWI76_RS26830 at 5562.324 kb on - strand at 5562.454 kb on - strand, within BWI76_RS26835 at 5562.471 kb on + strand, within BWI76_RS26835 at 5562.478 kb on - strand, within BWI76_RS26835 at 5562.484 kb on - strand, within BWI76_RS26835 at 5562.523 kb on + strand, within BWI76_RS26835 at 5562.604 kb on + strand, within BWI76_RS26835 at 5562.612 kb on - strand, within BWI76_RS26835 at 5562.612 kb on - strand, within BWI76_RS26835 at 5562.622 kb on - strand, within BWI76_RS26835 at 5562.657 kb on + strand, within BWI76_RS26835 at 5562.665 kb on - strand, within BWI76_RS26835 at 5562.969 kb on - strand at 5562.975 kb on - strand at 5563.055 kb on + strand at 5563.057 kb on + strand at 5563.119 kb on + strand at 5563.123 kb on - strand at 5563.142 kb on - strand at 5563.219 kb on + strand at 5563.355 kb on - strand, within BWI76_RS26840 at 5563.497 kb on - strand, within BWI76_RS26840 at 5563.520 kb on + strand, within BWI76_RS26840 at 5563.520 kb on + strand, within BWI76_RS26840 at 5563.528 kb on - strand at 5563.788 kb on + strand, within BWI76_RS26840
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 5,561,398 + -3.1 5,561,477 + BWI76_RS26830 0.10 -1.7 5,561,477 + BWI76_RS26830 0.10 -1.7 5,561,544 - BWI76_RS26830 0.17 -0.7 5,561,772 + BWI76_RS26830 0.39 +1.2 5,561,829 + BWI76_RS26830 0.45 -0.5 5,561,860 + BWI76_RS26830 0.48 -0.6 5,561,868 - BWI76_RS26830 0.49 +0.8 5,561,876 - BWI76_RS26830 0.50 +0.7 5,562,152 + BWI76_RS26830 0.77 -0.2 5,562,160 - BWI76_RS26830 0.78 -1.3 5,562,324 - +0.1 5,562,454 - BWI76_RS26835 0.13 +1.3 5,562,471 + BWI76_RS26835 0.17 +0.8 5,562,478 - BWI76_RS26835 0.18 +2.5 5,562,484 - BWI76_RS26835 0.19 +0.2 5,562,523 + BWI76_RS26835 0.28 -0.5 5,562,604 + BWI76_RS26835 0.45 +0.6 5,562,612 - BWI76_RS26835 0.46 +1.3 5,562,612 - BWI76_RS26835 0.46 +0.1 5,562,622 - BWI76_RS26835 0.49 -0.1 5,562,657 + BWI76_RS26835 0.56 +0.2 5,562,665 - BWI76_RS26835 0.58 +1.3 5,562,969 - -0.4 5,562,975 - +0.1 5,563,055 + +0.5 5,563,057 + +0.4 5,563,119 + +1.3 5,563,123 - -1.0 5,563,142 - +0.0 5,563,219 + -0.9 5,563,355 - BWI76_RS26840 0.12 +1.0 5,563,497 - BWI76_RS26840 0.16 +2.4 5,563,520 + BWI76_RS26840 0.16 -1.3 5,563,520 + BWI76_RS26840 0.16 -0.7 5,563,528 - +2.3 5,563,788 + BWI76_RS26840 0.23 +1.0
Or see this region's nucleotide sequence