Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23695

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23685 and BWI76_RS23690 are separated by 1 nucleotidesBWI76_RS23690 and BWI76_RS23695 are separated by 249 nucleotidesBWI76_RS23695 and BWI76_RS23700 overlap by 4 nucleotides BWI76_RS23685: BWI76_RS23685 - MFS transporter, at 4,943,170 to 4,944,504 _RS23685 BWI76_RS23690: BWI76_RS23690 - putative glyoxalase/bleomycin resistance protein/dioxygenase, at 4,944,506 to 4,944,895 _RS23690 BWI76_RS23695: BWI76_RS23695 - deoxyribonyl-CoA synthetase (from data), at 4,945,145 to 4,946,701 _RS23695 BWI76_RS23700: BWI76_RS23700 - glycerate CoA-transferase (from data), at 4,946,698 to 4,948,299 _RS23700 Position (kb) 4945 4946 4947Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 4944.176 kb on + strand, within BWI76_RS23685at 4944.290 kb on + strand, within BWI76_RS23685at 4944.290 kb on + strand, within BWI76_RS23685at 4944.298 kb on - strand, within BWI76_RS23685at 4944.345 kb on - strand, within BWI76_RS23685at 4944.633 kb on + strand, within BWI76_RS23690at 4944.682 kb on + strand, within BWI76_RS23690at 4944.957 kb on + strandat 4944.965 kb on - strandat 4945.069 kb on - strandat 4945.185 kb on + strandat 4945.303 kb on + strand, within BWI76_RS23695at 4945.323 kb on - strand, within BWI76_RS23695at 4945.347 kb on - strand, within BWI76_RS23695at 4945.423 kb on + strand, within BWI76_RS23695at 4945.424 kb on - strand, within BWI76_RS23695at 4945.493 kb on + strand, within BWI76_RS23695at 4945.501 kb on - strand, within BWI76_RS23695at 4945.734 kb on + strand, within BWI76_RS23695at 4946.116 kb on - strand, within BWI76_RS23695at 4946.116 kb on - strand, within BWI76_RS23695at 4946.288 kb on - strand, within BWI76_RS23695at 4946.519 kb on + strand, within BWI76_RS23695at 4946.527 kb on - strand, within BWI76_RS23695at 4946.867 kb on + strand, within BWI76_RS23700at 4946.875 kb on - strand, within BWI76_RS23700at 4946.879 kb on + strand, within BWI76_RS23700at 4947.527 kb on + strand, within BWI76_RS23700at 4947.527 kb on + strand, within BWI76_RS23700at 4947.535 kb on - strand, within BWI76_RS23700at 4947.686 kb on - strand, within BWI76_RS23700

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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4,944,176 + BWI76_RS23685 0.75 -0.6
4,944,290 + BWI76_RS23685 0.84 -0.2
4,944,290 + BWI76_RS23685 0.84 -0.5
4,944,298 - BWI76_RS23685 0.84 -0.1
4,944,345 - BWI76_RS23685 0.88 +0.7
4,944,633 + BWI76_RS23690 0.33 -1.1
4,944,682 + BWI76_RS23690 0.45 +0.2
4,944,957 + -0.4
4,944,965 - +1.0
4,945,069 - -1.7
4,945,185 + -3.5
4,945,303 + BWI76_RS23695 0.10 -4.7
4,945,323 - BWI76_RS23695 0.11 -0.8
4,945,347 - BWI76_RS23695 0.13 -1.8
4,945,423 + BWI76_RS23695 0.18 -1.1
4,945,424 - BWI76_RS23695 0.18 -1.9
4,945,493 + BWI76_RS23695 0.22 -2.5
4,945,501 - BWI76_RS23695 0.23 -1.1
4,945,734 + BWI76_RS23695 0.38 -5.3
4,946,116 - BWI76_RS23695 0.62 -2.3
4,946,116 - BWI76_RS23695 0.62 -3.2
4,946,288 - BWI76_RS23695 0.73 -1.6
4,946,519 + BWI76_RS23695 0.88 -4.6
4,946,527 - BWI76_RS23695 0.89 -3.9
4,946,867 + BWI76_RS23700 0.11 -1.6
4,946,875 - BWI76_RS23700 0.11 -4.7
4,946,879 + BWI76_RS23700 0.11 -3.1
4,947,527 + BWI76_RS23700 0.52 -0.4
4,947,527 + BWI76_RS23700 0.52 -2.3
4,947,535 - BWI76_RS23700 0.52 -3.2
4,947,686 - BWI76_RS23700 0.62 -4.1

Or see this region's nucleotide sequence