Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0492

Experiment: 6-O-Acetyl-D-glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT0490 and BT0491 are separated by 335 nucleotidesBT0491 and BT0492 overlap by 4 nucleotidesBT0492 and BT0493 are separated by 33 nucleotidesBT0493 and BT0494 are separated by 51 nucleotides BT0490: BT0490 - hypothetical protein (NCBI ptt file), at 606,480 to 606,746 BT0490 BT0491: BT0491 - conserved hypothetical protein (NCBI ptt file), at 607,082 to 607,408 BT0491 BT0492: BT0492 - integral membrane protein (NCBI ptt file), at 607,405 to 608,022 BT0492 BT0493: BT0493 - hypothetical protein (NCBI ptt file), at 608,056 to 608,757 BT0493 BT0494: BT0494 - protoporphyrin IX magnesium chelatase (NCBI ptt file), at 608,809 to 611,373 BT0494 Position (kb) 607 608 609Strain fitness (log2 ratio) -3 -2 -1 0 1at 606.469 kb on - strandat 606.614 kb on + strand, within BT0490at 606.663 kb on + strand, within BT0490at 606.663 kb on + strand, within BT0490at 606.664 kb on - strand, within BT0490at 606.740 kb on + strandat 606.762 kb on - strandat 606.768 kb on + strandat 606.772 kb on + strandat 606.772 kb on + strandat 606.799 kb on + strandat 606.800 kb on - strandat 606.828 kb on - strandat 606.844 kb on + strandat 606.879 kb on + strandat 606.903 kb on - strandat 606.911 kb on + strandat 606.983 kb on + strandat 606.983 kb on + strandat 606.983 kb on + strandat 607.079 kb on + strandat 607.080 kb on - strandat 607.112 kb on - strandat 607.214 kb on - strand, within BT0491at 607.289 kb on - strand, within BT0491at 607.289 kb on - strand, within BT0491at 607.307 kb on + strand, within BT0491at 607.476 kb on + strand, within BT0492at 607.578 kb on - strand, within BT0492at 607.578 kb on - strand, within BT0492at 607.593 kb on + strand, within BT0492at 607.694 kb on - strand, within BT0492at 607.780 kb on - strand, within BT0492at 607.910 kb on + strand, within BT0492at 607.958 kb on - strand, within BT0492at 608.005 kb on - strandat 608.005 kb on - strandat 608.013 kb on + strandat 608.014 kb on - strandat 608.027 kb on - strandat 608.140 kb on + strand, within BT0493at 608.288 kb on + strand, within BT0493at 608.296 kb on + strand, within BT0493at 608.391 kb on - strand, within BT0493at 608.462 kb on - strand, within BT0493at 608.564 kb on - strand, within BT0493at 608.625 kb on - strand, within BT0493at 608.724 kb on + strandat 608.734 kb on - strandat 608.737 kb on + strandat 608.737 kb on + strandat 608.761 kb on - strandat 608.810 kb on + strandat 608.863 kb on - strandat 608.904 kb on + strandat 608.905 kb on - strandat 608.994 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 6-O-Acetyl-D-glucose (C)
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606,469 - +0.1
606,614 + BT0490 0.50 -0.3
606,663 + BT0490 0.69 +1.7
606,663 + BT0490 0.69 +0.1
606,664 - BT0490 0.69 -1.6
606,740 + -1.3
606,762 - -0.3
606,768 + -1.9
606,772 + +0.1
606,772 + -0.1
606,799 + +1.1
606,800 - +0.6
606,828 - -1.4
606,844 + -1.4
606,879 + -1.0
606,903 - +0.1
606,911 + -1.1
606,983 + -1.0
606,983 + -0.3
606,983 + +0.4
607,079 + -0.8
607,080 - +1.2
607,112 - -0.7
607,214 - BT0491 0.40 -1.2
607,289 - BT0491 0.63 +0.2
607,289 - BT0491 0.63 -2.3
607,307 + BT0491 0.69 -0.4
607,476 + BT0492 0.11 -0.6
607,578 - BT0492 0.28 +0.1
607,578 - BT0492 0.28 +1.7
607,593 + BT0492 0.30 -0.4
607,694 - BT0492 0.47 -0.9
607,780 - BT0492 0.61 -1.7
607,910 + BT0492 0.82 +0.9
607,958 - BT0492 0.89 +0.1
608,005 - -0.7
608,005 - -2.0
608,013 + -1.4
608,014 - +0.1
608,027 - -3.1
608,140 + BT0493 0.12 +0.1
608,288 + BT0493 0.33 -1.2
608,296 + BT0493 0.34 -0.6
608,391 - BT0493 0.48 -1.2
608,462 - BT0493 0.58 -1.4
608,564 - BT0493 0.72 -0.1
608,625 - BT0493 0.81 +1.7
608,724 + -0.1
608,734 - -1.7
608,737 + +1.1
608,737 + -1.7
608,761 - -0.9
608,810 + -1.2
608,863 - +0.1
608,904 + -2.7
608,905 - -0.5
608,994 + +0.1

Or see this region's nucleotide sequence