Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16015 and BWI76_RS16020 are separated by 437 nucleotides BWI76_RS16020 and BWI76_RS16025 overlap by 1 nucleotides BWI76_RS16025 and BWI76_RS16030 are separated by 17 nucleotides
BWI76_RS16015: BWI76_RS16015 - pheromone autoinducer 2 transporter, at 3,320,645 to 3,321,679
_RS16015
BWI76_RS16020: BWI76_RS16020 - malonate decarboxylase subunit alpha, at 3,322,117 to 3,323,772
_RS16020
BWI76_RS16025: BWI76_RS16025 - triphosphoribosyl-dephospho-CoA synthase, at 3,323,772 to 3,324,614
_RS16025
BWI76_RS16030: BWI76_RS16030 - malonate decarboxylase acyl carrier protein, at 3,324,632 to 3,324,931
_RS16030
Position (kb)
3322
3323
3324 Strain fitness (log2 ratio)
-2
-1
0
1 at 3321.150 kb on + strand, within BWI76_RS16015 at 3321.477 kb on + strand, within BWI76_RS16015 at 3321.756 kb on - strand at 3321.872 kb on + strand at 3321.891 kb on - strand at 3322.068 kb on + strand at 3322.445 kb on + strand, within BWI76_RS16020 at 3322.509 kb on - strand, within BWI76_RS16020 at 3322.596 kb on + strand, within BWI76_RS16020 at 3322.604 kb on - strand, within BWI76_RS16020 at 3322.910 kb on + strand, within BWI76_RS16020 at 3322.965 kb on - strand, within BWI76_RS16020 at 3323.076 kb on - strand, within BWI76_RS16020 at 3323.385 kb on - strand, within BWI76_RS16020 at 3323.525 kb on - strand, within BWI76_RS16020 at 3323.737 kb on + strand at 3324.104 kb on - strand, within BWI76_RS16025 at 3324.304 kb on - strand, within BWI76_RS16025 at 3324.729 kb on - strand, within BWI76_RS16030
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 3,321,150 + BWI76_RS16015 0.49 +0.9 3,321,477 + BWI76_RS16015 0.80 -0.1 3,321,756 - -0.8 3,321,872 + -1.2 3,321,891 - +0.8 3,322,068 + +0.5 3,322,445 + BWI76_RS16020 0.20 +1.2 3,322,509 - BWI76_RS16020 0.24 +0.8 3,322,596 + BWI76_RS16020 0.29 -0.1 3,322,604 - BWI76_RS16020 0.29 +0.1 3,322,910 + BWI76_RS16020 0.48 +1.4 3,322,965 - BWI76_RS16020 0.51 +0.1 3,323,076 - BWI76_RS16020 0.58 +1.2 3,323,385 - BWI76_RS16020 0.77 +0.2 3,323,525 - BWI76_RS16020 0.85 -0.2 3,323,737 + +0.2 3,324,104 - BWI76_RS16025 0.39 +0.7 3,324,304 - BWI76_RS16025 0.63 -0.1 3,324,729 - BWI76_RS16030 0.32 -1.9
Or see this region's nucleotide sequence