Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13590 and BWI76_RS13595 are separated by 75 nucleotides BWI76_RS13595 and BWI76_RS13600 are separated by 79 nucleotides BWI76_RS13600 and BWI76_RS13605 are separated by 40 nucleotides BWI76_RS13605 and BWI76_RS13610 are separated by 43 nucleotides
BWI76_RS13590: BWI76_RS13590 - hypothetical protein, at 2,832,954 to 2,833,271
_RS13590
BWI76_RS13595: BWI76_RS13595 - transcriptional regulator, at 2,833,347 to 2,833,643
_RS13595
BWI76_RS13600: BWI76_RS13600 - hypothetical protein, at 2,833,723 to 2,834,169
_RS13600
BWI76_RS13605: BWI76_RS13605 - porin, at 2,834,210 to 2,835,814
_RS13605
BWI76_RS13610: BWI76_RS13610 - sugar transporter, at 2,835,858 to 2,837,240
_RS13610
Position (kb)
2834
2835
2836 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2833.216 kb on + strand, within BWI76_RS13590 at 2833.333 kb on + strand at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.437 kb on + strand, within BWI76_RS13595 at 2833.477 kb on + strand, within BWI76_RS13595 at 2833.480 kb on + strand, within BWI76_RS13595 at 2833.485 kb on + strand, within BWI76_RS13595 at 2833.486 kb on + strand, within BWI76_RS13595 at 2833.486 kb on + strand, within BWI76_RS13595 at 2833.486 kb on + strand, within BWI76_RS13595 at 2833.515 kb on + strand, within BWI76_RS13595 at 2833.525 kb on + strand, within BWI76_RS13595 at 2833.525 kb on + strand, within BWI76_RS13595 at 2833.525 kb on + strand, within BWI76_RS13595 at 2833.536 kb on + strand, within BWI76_RS13595 at 2833.567 kb on + strand, within BWI76_RS13595 at 2833.567 kb on + strand, within BWI76_RS13595 at 2833.579 kb on + strand, within BWI76_RS13595 at 2833.599 kb on + strand, within BWI76_RS13595 at 2833.673 kb on + strand at 2833.673 kb on + strand at 2833.722 kb on - strand at 2833.781 kb on + strand, within BWI76_RS13600 at 2833.781 kb on + strand, within BWI76_RS13600 at 2833.859 kb on + strand, within BWI76_RS13600 at 2833.920 kb on + strand, within BWI76_RS13600 at 2834.133 kb on + strand at 2834.144 kb on + strand at 2834.150 kb on + strand at 2834.173 kb on + strand at 2834.212 kb on - strand at 2834.240 kb on - strand at 2834.248 kb on - strand at 2834.248 kb on - strand at 2834.251 kb on - strand at 2834.271 kb on - strand at 2834.388 kb on - strand, within BWI76_RS13605 at 2834.400 kb on - strand, within BWI76_RS13605 at 2834.432 kb on + strand, within BWI76_RS13605 at 2834.483 kb on + strand at 2834.598 kb on + strand, within BWI76_RS13605 at 2834.880 kb on + strand, within BWI76_RS13605 at 2834.898 kb on + strand, within BWI76_RS13605 at 2835.054 kb on + strand, within BWI76_RS13605 at 2835.243 kb on - strand, within BWI76_RS13605 at 2835.311 kb on - strand, within BWI76_RS13605 at 2835.591 kb on - strand, within BWI76_RS13605 at 2835.625 kb on + strand, within BWI76_RS13605 at 2835.625 kb on + strand, within BWI76_RS13605 at 2835.795 kb on - strand at 2835.936 kb on - strand at 2835.967 kb on + strand at 2835.999 kb on - strand, within BWI76_RS13610 at 2836.351 kb on - strand, within BWI76_RS13610 at 2836.576 kb on - strand, within BWI76_RS13610 at 2836.731 kb on - strand, within BWI76_RS13610
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 2,833,216 + BWI76_RS13590 0.82 -0.3 2,833,333 + -2.9 2,833,437 + BWI76_RS13595 0.30 -2.6 2,833,437 + BWI76_RS13595 0.30 -1.8 2,833,437 + BWI76_RS13595 0.30 -1.9 2,833,437 + BWI76_RS13595 0.30 -2.3 2,833,437 + BWI76_RS13595 0.30 -1.6 2,833,477 + BWI76_RS13595 0.44 -0.3 2,833,480 + BWI76_RS13595 0.45 -0.2 2,833,485 + BWI76_RS13595 0.46 +0.0 2,833,486 + BWI76_RS13595 0.47 -0.7 2,833,486 + BWI76_RS13595 0.47 +0.5 2,833,486 + BWI76_RS13595 0.47 -0.2 2,833,515 + BWI76_RS13595 0.57 -0.4 2,833,525 + BWI76_RS13595 0.60 -1.7 2,833,525 + BWI76_RS13595 0.60 -0.6 2,833,525 + BWI76_RS13595 0.60 -0.4 2,833,536 + BWI76_RS13595 0.64 -1.4 2,833,567 + BWI76_RS13595 0.74 -1.7 2,833,567 + BWI76_RS13595 0.74 -1.9 2,833,579 + BWI76_RS13595 0.78 -0.6 2,833,599 + BWI76_RS13595 0.85 -0.4 2,833,673 + +2.4 2,833,673 + +1.6 2,833,722 - -0.1 2,833,781 + BWI76_RS13600 0.13 +1.0 2,833,781 + BWI76_RS13600 0.13 -0.9 2,833,859 + BWI76_RS13600 0.30 -0.1 2,833,920 + BWI76_RS13600 0.44 -0.4 2,834,133 + +0.3 2,834,144 + -0.6 2,834,150 + +1.0 2,834,173 + +0.3 2,834,212 - -1.5 2,834,240 - +0.3 2,834,248 - +3.9 2,834,248 - +0.6 2,834,251 - +0.9 2,834,271 - -1.6 2,834,388 - BWI76_RS13605 0.11 +0.2 2,834,400 - BWI76_RS13605 0.12 +0.6 2,834,432 + BWI76_RS13605 0.14 +0.7 2,834,483 + -1.9 2,834,598 + BWI76_RS13605 0.24 +1.7 2,834,880 + BWI76_RS13605 0.42 -2.2 2,834,898 + BWI76_RS13605 0.43 -0.5 2,835,054 + BWI76_RS13605 0.53 -2.4 2,835,243 - BWI76_RS13605 0.64 -0.0 2,835,311 - BWI76_RS13605 0.69 +0.6 2,835,591 - BWI76_RS13605 0.86 -0.7 2,835,625 + BWI76_RS13605 0.88 +1.9 2,835,625 + BWI76_RS13605 0.88 +1.1 2,835,795 - +0.1 2,835,936 - -0.7 2,835,967 + -0.3 2,835,999 - BWI76_RS13610 0.10 -0.0 2,836,351 - BWI76_RS13610 0.36 -1.1 2,836,576 - BWI76_RS13610 0.52 -0.2 2,836,731 - BWI76_RS13610 0.63 -1.9
Or see this region's nucleotide sequence