Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07445

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07440 and BWI76_RS07445 are separated by 76 nucleotidesBWI76_RS07445 and BWI76_RS07450 are separated by 109 nucleotides BWI76_RS07440: BWI76_RS07440 - miniconductance mechanosensitive channel, at 1,569,800 to 1,571,044 _RS07440 BWI76_RS07445: BWI76_RS07445 - MFS transporter, at 1,571,121 to 1,572,548 _RS07445 BWI76_RS07450: BWI76_RS07450 - transcriptional regulator, at 1,572,658 to 1,573,524 _RS07450 Position (kb) 1571 1572 1573Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1570.172 kb on - strand, within BWI76_RS07440at 1570.330 kb on + strand, within BWI76_RS07440at 1570.333 kb on - strand, within BWI76_RS07440at 1570.363 kb on + strand, within BWI76_RS07440at 1570.371 kb on - strand, within BWI76_RS07440at 1570.371 kb on - strand, within BWI76_RS07440at 1570.393 kb on - strand, within BWI76_RS07440at 1570.468 kb on - strand, within BWI76_RS07440at 1570.716 kb on + strand, within BWI76_RS07440at 1570.831 kb on - strand, within BWI76_RS07440at 1570.845 kb on + strand, within BWI76_RS07440at 1570.907 kb on + strand, within BWI76_RS07440at 1570.920 kb on + strandat 1570.920 kb on + strandat 1570.923 kb on - strandat 1570.928 kb on - strandat 1570.930 kb on + strandat 1570.938 kb on - strandat 1570.938 kb on - strandat 1571.031 kb on + strandat 1571.052 kb on + strandat 1571.067 kb on + strandat 1571.075 kb on - strandat 1571.135 kb on - strandat 1571.147 kb on + strandat 1571.186 kb on + strandat 1571.421 kb on + strand, within BWI76_RS07445at 1571.490 kb on + strand, within BWI76_RS07445at 1571.873 kb on + strand, within BWI76_RS07445at 1571.924 kb on + strand, within BWI76_RS07445at 1571.932 kb on - strand, within BWI76_RS07445at 1571.984 kb on + strand, within BWI76_RS07445at 1572.283 kb on - strand, within BWI76_RS07445at 1572.494 kb on - strandat 1572.507 kb on + strandat 1572.571 kb on - strandat 1572.924 kb on + strand, within BWI76_RS07450at 1573.171 kb on - strand, within BWI76_RS07450at 1573.321 kb on + strand, within BWI76_RS07450at 1573.332 kb on - strand, within BWI76_RS07450at 1573.344 kb on + strand, within BWI76_RS07450at 1573.430 kb on - strand, within BWI76_RS07450

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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1,570,172 - BWI76_RS07440 0.30 -0.8
1,570,330 + BWI76_RS07440 0.43 +0.2
1,570,333 - BWI76_RS07440 0.43 -1.3
1,570,363 + BWI76_RS07440 0.45 -0.3
1,570,371 - BWI76_RS07440 0.46 -0.8
1,570,371 - BWI76_RS07440 0.46 -0.6
1,570,393 - BWI76_RS07440 0.48 +2.8
1,570,468 - BWI76_RS07440 0.54 +0.2
1,570,716 + BWI76_RS07440 0.74 +0.3
1,570,831 - BWI76_RS07440 0.83 -0.1
1,570,845 + BWI76_RS07440 0.84 -0.2
1,570,907 + BWI76_RS07440 0.89 +4.0
1,570,920 + -1.0
1,570,920 + -0.3
1,570,923 - +0.1
1,570,928 - +0.2
1,570,930 + +1.9
1,570,938 - -0.5
1,570,938 - -0.0
1,571,031 + +1.7
1,571,052 + -0.2
1,571,067 + -0.6
1,571,075 - +0.0
1,571,135 - +0.3
1,571,147 + +0.1
1,571,186 + -0.9
1,571,421 + BWI76_RS07445 0.21 -3.1
1,571,490 + BWI76_RS07445 0.26 -1.2
1,571,873 + BWI76_RS07445 0.53 -1.1
1,571,924 + BWI76_RS07445 0.56 -0.0
1,571,932 - BWI76_RS07445 0.57 -0.3
1,571,984 + BWI76_RS07445 0.60 -0.3
1,572,283 - BWI76_RS07445 0.81 -0.0
1,572,494 - -1.4
1,572,507 + +0.4
1,572,571 - +0.1
1,572,924 + BWI76_RS07450 0.31 -0.0
1,573,171 - BWI76_RS07450 0.59 -1.0
1,573,321 + BWI76_RS07450 0.76 +0.0
1,573,332 - BWI76_RS07450 0.78 -1.0
1,573,344 + BWI76_RS07450 0.79 +1.0
1,573,430 - BWI76_RS07450 0.89 +0.3

Or see this region's nucleotide sequence