Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09265 and BWI76_RS09270 are separated by 140 nucleotides BWI76_RS09270 and BWI76_RS09275 are separated by 16 nucleotides
BWI76_RS09265: BWI76_RS09265 - oxidoreductase, at 1,951,152 to 1,952,915
_RS09265
BWI76_RS09270: BWI76_RS09270 - capsid scaffold-like protein, at 1,953,056 to 1,953,889
_RS09270
BWI76_RS09275: BWI76_RS09275 - major capsid protein, at 1,953,906 to 1,954,958
_RS09275
Position (kb)
1953
1954 Strain fitness (log2 ratio)
-2
-1
0
1 at 1952.190 kb on + strand, within BWI76_RS09265 at 1952.244 kb on - strand, within BWI76_RS09265 at 1952.260 kb on + strand, within BWI76_RS09265 at 1952.272 kb on + strand, within BWI76_RS09265 at 1952.370 kb on - strand, within BWI76_RS09265 at 1952.374 kb on - strand, within BWI76_RS09265 at 1952.374 kb on - strand, within BWI76_RS09265 at 1952.410 kb on - strand, within BWI76_RS09265 at 1952.599 kb on - strand, within BWI76_RS09265 at 1952.750 kb on + strand at 1952.767 kb on - strand at 1952.767 kb on - strand at 1952.935 kb on + strand at 1952.938 kb on - strand at 1952.993 kb on + strand at 1953.153 kb on + strand, within BWI76_RS09270 at 1953.166 kb on + strand, within BWI76_RS09270 at 1953.166 kb on + strand, within BWI76_RS09270 at 1953.166 kb on + strand, within BWI76_RS09270 at 1953.209 kb on + strand, within BWI76_RS09270 at 1953.209 kb on + strand, within BWI76_RS09270 at 1953.209 kb on + strand, within BWI76_RS09270 at 1953.420 kb on + strand, within BWI76_RS09270 at 1953.694 kb on - strand, within BWI76_RS09270 at 1953.741 kb on - strand, within BWI76_RS09270 at 1954.046 kb on - strand, within BWI76_RS09275 at 1954.208 kb on - strand, within BWI76_RS09275 at 1954.310 kb on + strand, within BWI76_RS09275 at 1954.325 kb on - strand, within BWI76_RS09275 at 1954.356 kb on - strand, within BWI76_RS09275 at 1954.620 kb on - strand, within BWI76_RS09275
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 1,952,190 + BWI76_RS09265 0.59 -0.4 1,952,244 - BWI76_RS09265 0.62 +0.5 1,952,260 + BWI76_RS09265 0.63 +0.7 1,952,272 + BWI76_RS09265 0.63 -0.7 1,952,370 - BWI76_RS09265 0.69 +1.3 1,952,374 - BWI76_RS09265 0.69 +0.7 1,952,374 - BWI76_RS09265 0.69 +0.9 1,952,410 - BWI76_RS09265 0.71 -0.1 1,952,599 - BWI76_RS09265 0.82 -0.1 1,952,750 + -0.5 1,952,767 - +0.5 1,952,767 - -1.2 1,952,935 + +0.2 1,952,938 - +0.4 1,952,993 + +0.5 1,953,153 + BWI76_RS09270 0.12 -0.2 1,953,166 + BWI76_RS09270 0.13 +1.2 1,953,166 + BWI76_RS09270 0.13 +0.8 1,953,166 + BWI76_RS09270 0.13 -0.3 1,953,209 + BWI76_RS09270 0.18 -2.1 1,953,209 + BWI76_RS09270 0.18 +0.7 1,953,209 + BWI76_RS09270 0.18 +0.6 1,953,420 + BWI76_RS09270 0.44 +0.4 1,953,694 - BWI76_RS09270 0.76 +0.1 1,953,741 - BWI76_RS09270 0.82 +1.3 1,954,046 - BWI76_RS09275 0.13 -0.1 1,954,208 - BWI76_RS09275 0.29 +1.6 1,954,310 + BWI76_RS09275 0.38 +0.5 1,954,325 - BWI76_RS09275 0.40 +0.6 1,954,356 - BWI76_RS09275 0.43 +0.2 1,954,620 - BWI76_RS09275 0.68 -0.1
Or see this region's nucleotide sequence