Experiment: 2'-Deoxyinosine 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06790 and BWI76_RS06795 are separated by 36 nucleotides BWI76_RS06795 and BWI76_RS06800 are separated by 66 nucleotides BWI76_RS06800 and BWI76_RS06805 are separated by 14 nucleotides BWI76_RS06805 and BWI76_RS06810 are separated by 69 nucleotides
BWI76_RS06790: BWI76_RS06790 - mechanosensitive channel MscK, at 1,424,129 to 1,427,470
_RS06790
BWI76_RS06795: BWI76_RS06795 - hypothetical protein, at 1,427,507 to 1,428,067
_RS06795
BWI76_RS06800: BWI76_RS06800 - DUF2496 domain-containing protein, at 1,428,134 to 1,428,307
_RS06800
BWI76_RS06805: BWI76_RS06805 - primosomal replication protein N'', at 1,428,322 to 1,428,849
_RS06805
BWI76_RS06810: BWI76_RS06810 - hypothetical protein, at 1,428,919 to 1,429,296
_RS06810
Position (kb)
1428
1429 Strain fitness (log2 ratio)
-1
0
1 at 1427.169 kb on - strand at 1427.169 kb on - strand at 1427.176 kb on + strand at 1427.333 kb on + strand at 1427.341 kb on - strand at 1427.442 kb on - strand at 1427.707 kb on + strand, within BWI76_RS06795 at 1427.840 kb on + strand, within BWI76_RS06795 at 1427.848 kb on - strand, within BWI76_RS06795 at 1427.871 kb on + strand, within BWI76_RS06795 at 1427.879 kb on - strand, within BWI76_RS06795 at 1428.046 kb on + strand at 1428.274 kb on + strand, within BWI76_RS06800 at 1428.450 kb on - strand, within BWI76_RS06805 at 1428.556 kb on - strand, within BWI76_RS06805 at 1428.707 kb on + strand, within BWI76_RS06805 at 1428.879 kb on + strand at 1428.974 kb on - strand, within BWI76_RS06810 at 1429.029 kb on + strand, within BWI76_RS06810 at 1429.141 kb on - strand, within BWI76_RS06810 at 1429.250 kb on - strand, within BWI76_RS06810 at 1429.290 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 10 mM (C) remove 1,427,169 - +0.6 1,427,169 - -0.4 1,427,176 + -1.7 1,427,333 + +0.1 1,427,341 - -0.1 1,427,442 - +0.6 1,427,707 + BWI76_RS06795 0.36 +0.3 1,427,840 + BWI76_RS06795 0.59 -0.2 1,427,848 - BWI76_RS06795 0.61 +0.1 1,427,871 + BWI76_RS06795 0.65 -0.1 1,427,879 - BWI76_RS06795 0.66 +0.7 1,428,046 + +0.2 1,428,274 + BWI76_RS06800 0.80 -1.4 1,428,450 - BWI76_RS06805 0.24 +0.3 1,428,556 - BWI76_RS06805 0.44 -0.0 1,428,707 + BWI76_RS06805 0.73 +1.2 1,428,879 + -0.2 1,428,974 - BWI76_RS06810 0.15 -1.0 1,429,029 + BWI76_RS06810 0.29 -0.2 1,429,141 - BWI76_RS06810 0.59 -1.5 1,429,250 - BWI76_RS06810 0.88 -0.1 1,429,290 + +0.6
Or see this region's nucleotide sequence