Strain Fitness in Shewanella oneidensis MR-1 around SO_A0134

Experiment: LB; anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB; anaerobic
117,265	+				-2.3
117,265	+				-0.2
117,265	+				-0.2
117,265	+				+0.5
117,265	+				+0.8
117,265	+				+0.7
117,265	+				-2.2
117,265	+				+0.4
117,265	+				+0.7
117,265	+				+1.0
117,265	+				-0.4
117,265	-				-0.2
117,265	-				-0.6
117,265	-				-0.1
117,265	-				-0.2
117,273	-				-1.8
117,273	-				-0.6
117,273	-				-2.9
117,273	-				+1.8
117,273	-				-0.4
117,273	-				+0.1
117,273	-				+0.7
117,273	-				-1.8
117,273	-				-0.2
117,273	-				+1.0
117,273	-				+2.0
117,273	-				+0.5
117,273	-				+0.6
117,275	+				+1.2
117,283	-				+1.8
117,289	+				-0.8
117,290	+				+0.2
117,298	-				+0.8
117,314	+				+0.5
117,315	-				+2.8
117,315	-				+0.8
117,316	-				+0.5
117,323	-				-2.8
117,330	-				+0.2
117,345	-				-1.1
117,361	+		SO_A0133	0.11	+0.6
117,378	+		SO_A0133	0.13	-2.1
117,386	-		SO_A0133	0.14	-2.3
117,393	+		SO_A0133	0.14	-2.1
117,403	+		SO_A0133	0.15	-1.2
117,410	+		SO_A0133	0.16	-2.3
117,411	-		SO_A0133	0.16	-2.6
117,411	-		SO_A0133	0.16	-2.6
117,411	-		SO_A0133	0.16	+0.2
117,411	-		SO_A0133	0.16	-0.9
117,411	-		SO_A0133	0.16	+0.5
117,411	-		SO_A0133	0.16	-2.3
117,434	+		SO_A0133	0.19	-0.1
117,437	-		SO_A0133	0.19	-1.0
117,441	+		SO_A0133	0.19	-0.2
117,442	-		SO_A0133	0.20	+0.3
117,446	+		SO_A0133	0.20	+0.5
117,460	+		SO_A0133	0.21	-0.3
117,468	-		SO_A0133	0.22	-2.2
117,504	+		SO_A0133	0.26	+1.2
117,602	+		SO_A0133	0.37	+2.0
117,680	+		SO_A0133	0.45	-1.6
117,757	-		SO_A0133	0.53	+0.5
117,763	+		SO_A0133	0.54	+0.8
117,763	+		SO_A0133	0.54	+0.8
117,763	+		SO_A0133	0.54	-0.1
117,771	-		SO_A0133	0.54	-1.8
117,771	-		SO_A0133	0.54	+0.5
117,771	-		SO_A0133	0.54	+0.0
117,774	+		SO_A0133	0.55	+0.2
117,774	+		SO_A0133	0.55	+1.3
117,774	+		SO_A0133	0.55	+1.7
117,774	+		SO_A0133	0.55	-0.4
117,782	-		SO_A0133	0.56	-1.6
117,782	-		SO_A0133	0.56	+0.9
117,782	-		SO_A0133	0.56	+1.2
117,782	-		SO_A0133	0.56	-1.2
117,784	+		SO_A0133	0.56	-0.0
117,784	+		SO_A0133	0.56	+0.8
117,805	-		SO_A0133	0.58	-2.2
117,822	+		SO_A0133	0.60	+0.4
117,822	+		SO_A0133	0.60	+1.4
117,822	+		SO_A0133	0.60	-1.6
117,830	-		SO_A0133	0.61	+2.1
117,830	-		SO_A0133	0.61	+1.9
117,830	-		SO_A0133	0.61	+1.6
117,830	-		SO_A0133	0.61	-0.8
117,831	+		SO_A0133	0.61	-2.7
117,849	-		SO_A0133	0.63	+1.8
117,878	-		SO_A0133	0.66	-0.1
117,910	+		SO_A0133	0.69	-4.7
117,910	+		SO_A0133	0.69	+0.5
117,910	+		SO_A0133	0.69	-0.4
117,910	+		SO_A0133	0.69	-0.2
117,918	-		SO_A0133	0.70	+1.7
117,945	+		SO_A0133	0.73	+0.6
117,953	+		SO_A0133	0.74	-0.1
117,961	-		SO_A0133	0.75	+1.1
117,961	-		SO_A0133	0.75	+0.9
117,966	-		SO_A0133	0.75	-0.8
117,977	+		SO_A0133	0.76	+1.3
117,985	-		SO_A0133	0.77	+1.2
117,985	-		SO_A0133	0.77	+1.3
118,034	+		SO_A0133	0.82	+0.6
118,063	-		SO_A0133	0.85	-0.3
118,093	+		SO_A0133	0.89	-0.2
118,103	+		SO_A0133	0.90	-0.0
118,120	+				-0.2
118,141	-				-1.5
118,158	+				-0.2
118,168	+				-2.9
118,176	-				+0.9
118,233	-				-0.8
118,238	+				+0.5
118,246	+				+0.5
118,246	-				-0.4
118,274	+				-1.3
118,274	+				-0.7
118,274	+				+0.2
118,274	+				-1.2
118,362	+		SO_A0134	0.22	+0.3
118,374	+		SO_A0134	0.25	-0.3
118,416	+		SO_A0134	0.34	-1.9
118,416	+		SO_A0134	0.34	-1.0
118,416	+		SO_A0134	0.34	-1.5
118,418	+		SO_A0134	0.34	-1.2
118,424	-		SO_A0134	0.36	+0.8
118,424	-		SO_A0134	0.36	+2.8
118,424	-		SO_A0134	0.36	-3.0
118,424	-		SO_A0134	0.36	-1.4
118,424	-		SO_A0134	0.36	+0.2
118,428	+		SO_A0134	0.36	-0.9
118,452	+		SO_A0134	0.42	+2.4
118,460	-		SO_A0134	0.43	-0.9
118,460	-		SO_A0134	0.43	-1.2
118,460	-		SO_A0134	0.43	-1.0
118,460	-		SO_A0134	0.43	+0.2
118,476	-		SO_A0134	0.47	+1.2
118,532	+		SO_A0134	0.59	-1.0
118,554	+		SO_A0134	0.64	+0.4
118,562	+		SO_A0134	0.66	+0.5
118,562	-		SO_A0134	0.66	-1.6
118,562	-		SO_A0134	0.66	-0.3
118,567	+		SO_A0134	0.67	-1.3
118,580	+		SO_A0134	0.70	-0.4
118,580	+		SO_A0134	0.70	-0.2
118,580	+		SO_A0134	0.70	-0.5
118,580	+		SO_A0134	0.70	+0.3
118,580	+		SO_A0134	0.70	+0.7
118,580	+		SO_A0134	0.70	+1.3
118,580	+		SO_A0134	0.70	-1.5
118,580	+		SO_A0134	0.70	+0.8
118,580	+		SO_A0134	0.70	-0.5
118,580	+		SO_A0134	0.70	+0.4
118,580	+		SO_A0134	0.70	-0.2
118,580	+		SO_A0134	0.70	+0.0
118,580	+		SO_A0134	0.70	-0.0
118,580	+		SO_A0134	0.70	-2.2
118,580	+		SO_A0134	0.70	+0.7
118,580	+		SO_A0134	0.70	-0.6
118,580	+		SO_A0134	0.70	-0.6
118,581	-		SO_A0134	0.70	+1.0
118,588	-		SO_A0134	0.72	+0.0
118,588	-		SO_A0134	0.72	-0.8
118,588	-		SO_A0134	0.72	-0.6
118,588	-		SO_A0134	0.72	-0.2
118,588	-		SO_A0134	0.72	-0.0
118,588	-		SO_A0134	0.72	+0.4
118,623	+		SO_A0134	0.79	+0.4
118,623	+		SO_A0134	0.79	-0.4
118,645	+		SO_A0134	0.84	-0.5
118,659	-		SO_A0134	0.87	-1.3
118,678	+				+0.1
118,695	+				-1.8
118,695	+				+1.1
118,695	+				-1.0
118,695	+				-1.8
118,696	-				+0.5
118,702	+				+0.0
118,716	+				+0.6
118,717	-				+0.2
118,724	-				+1.1
118,736	+				-0.6
118,745	+				-0.7
118,753	-				-0.9
118,757	+				+1.1
118,757	+				-0.3
118,767	+				-2.6
118,767	+				-0.4
118,767	+				+0.6
118,767	+				-2.7
118,767	+				-2.1
118,767	+				-0.9
118,775	-				-0.3
118,775	-				-1.2
118,789	+				+0.8
118,798	+				-3.2
118,804	+				-1.1
118,806	-				-2.3
118,812	-				+1.8
118,812	-				-0.8
118,821	+				+0.9
118,841	+				-2.1
118,846	-				-0.2
118,860	-				-0.3
118,883	+				-1.8
118,899	+				-0.5
118,899	+				-2.6
118,907	-				-1.0
118,907	-				-0.4
118,907	-				-1.2
118,907	-				-0.9
118,933	+				-0.4
118,960	-				-0.2
119,011	-				+1.0
119,018	+				-0.5
119,026	-				+0.3
119,031	-				+0.4
119,034	-				+0.2
119,167	+				+0.4
119,175	-		SO_A0135	0.10	-0.9
119,200	-		SO_A0135	0.11	+0.0
119,209	-		SO_A0135	0.11	-0.2
119,242	+		SO_A0135	0.12	+4.4
119,245	+		SO_A0135	0.12	-0.8
119,245	+		SO_A0135	0.12	-0.8
119,245	+		SO_A0135	0.12	-0.1
119,305	-		SO_A0135	0.14	-0.3
119,307	+		SO_A0135	0.14	-0.1
119,307	+		SO_A0135	0.14	+0.7
119,315	-		SO_A0135	0.15	-1.5
119,315	-		SO_A0135	0.15	+0.1
119,315	-		SO_A0135	0.15	+0.2
119,315	-		SO_A0135	0.15	+0.2