Strain Fitness in Shewanella oneidensis MR-1 around SO1698

Experiment: LB; anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB; anaerobic
1,785,513	-				+0.1
1,785,552	-				-0.8
1,785,566	+				-1.5
1,785,573	-				+0.4
1,785,573	-				+0.6
1,785,573	-				-3.8
1,785,573	-				-1.9
1,785,576	+				+1.5
1,785,577	+				-0.7
1,785,584	-				+0.1
1,785,624	-				+0.5
1,785,684	+				-1.0
1,785,713	+				+0.6
1,785,730	+				-0.1
1,785,730	+				+0.2
1,785,738	-				-0.3
1,785,740	+				+1.6
1,785,748	-				-0.6
1,785,773	-				+1.4
1,785,784	-				+0.2
1,785,802	+				-1.5
1,785,809	-				-2.1
1,786,040	+				+0.7
1,786,048	-				-0.2
1,786,076	+				-2.9
1,786,113	-				-1.7
1,786,120	+				+1.1
1,786,143	+				-1.8
1,786,143	+				-0.8
1,786,148	+				-0.5
1,786,148	+				+0.4
1,786,151	-				-3.0
1,786,153	+				+0.6
1,786,155	+				-2.2
1,786,162	+				-0.6
1,786,174	+				+0.5
1,786,182	-				+0.8
1,786,182	-				+0.8
1,786,196	-				-0.3
1,786,201	+				-3.1
1,786,204	-				+0.8
1,786,204	-				+0.2
1,786,207	-				+0.8
1,786,207	-				-0.4
1,786,208	-				-1.1
1,786,264	+		SO1698	0.13	-0.1
1,786,274	+		SO1698	0.16	-0.0
1,786,279	+		SO1698	0.17	-1.5
1,786,282	-		SO1698	0.18	+1.4
1,786,289	+		SO1698	0.20	-0.8
1,786,289	+		SO1698	0.20	-2.1
1,786,296	+		SO1698	0.22	-0.4
1,786,296	+		SO1698	0.22	+2.0
1,786,321	-		SO1698	0.29	-0.7
1,786,335	+		SO1698	0.32	+1.7
1,786,339	-		SO1698	0.33	+1.3
1,786,344	+		SO1698	0.35	-1.2
1,786,357	+		SO1698	0.38	+1.3
1,786,361	-		SO1698	0.39	+0.2
1,786,378	-		SO1698	0.44	+0.3
1,786,399	+		SO1698	0.49	+1.9
1,786,399	+		SO1698	0.49	+1.0
1,786,406	-		SO1698	0.51	-0.4
1,786,407	-		SO1698	0.51	-0.8
1,786,407	-		SO1698	0.51	+1.8
1,786,407	-		SO1698	0.51	-1.8
1,786,421	+		SO1698	0.55	+0.2
1,786,421	+		SO1698	0.55	+0.5
1,786,421	+		SO1698	0.55	-3.6
1,786,422	-		SO1698	0.55	-0.1
1,786,429	+		SO1698	0.57	-0.1
1,786,429	-		SO1698	0.57	+0.8
1,786,437	-		SO1698	0.59	+1.2
1,786,437	-		SO1698	0.59	+3.5
1,786,437	-		SO1698	0.59	-2.4
1,786,451	+		SO1698	0.63	+1.1
1,786,455	-		SO1698	0.64	+3.6
1,786,457	+		SO1698	0.65	+0.8
1,786,457	+		SO1698	0.65	-0.0
1,786,457	+		SO1698	0.65	-0.5
1,786,471	-		SO1698	0.68	+1.1
1,786,477	+		SO1698	0.70	+2.1
1,786,477	+		SO1698	0.70	+0.3
1,786,477	+		SO1698	0.70	+1.5
1,786,477	+		SO1698	0.70	+1.0
1,786,477	+		SO1698	0.70	+0.6
1,786,477	+		SO1698	0.70	-1.2
1,786,477	+		SO1698	0.70	-0.9
1,786,477	+		SO1698	0.70	+0.3
1,786,477	+		SO1698	0.70	+0.8
1,786,478	+		SO1698	0.70	+0.6
1,786,484	+		SO1698	0.72	+0.6
1,786,484	+		SO1698	0.72	+0.1
1,786,484	+		SO1698	0.72	-0.2
1,786,484	+		SO1698	0.72	+0.6
1,786,485	-		SO1698	0.72	-0.2
1,786,485	-		SO1698	0.72	+1.6
1,786,485	-		SO1698	0.72	-1.0
1,786,485	-		SO1698	0.72	+1.5
1,786,485	-		SO1698	0.72	+1.2
1,786,485	-		SO1698	0.72	-1.5
1,786,485	-		SO1698	0.72	-2.0
1,786,485	-		SO1698	0.72	-0.4
1,786,485	-		SO1698	0.72	+0.9
1,786,492	+		SO1698	0.74	-0.0
1,786,492	+		SO1698	0.74	+3.8
1,786,492	-		SO1698	0.74	-1.1
1,786,500	-		SO1698	0.76	+2.5
1,786,500	-		SO1698	0.76	-0.5
1,786,500	-		SO1698	0.76	-3.3
1,786,500	-		SO1698	0.76	-3.1
1,786,500	-		SO1698	0.76	-0.0
1,786,500	-		SO1698	0.76	-0.4
1,786,500	-		SO1698	0.76	+0.9
1,786,536	+		SO1698	0.85	+0.1
1,786,542	+		SO1698	0.87	+0.7
1,786,542	+		SO1698	0.87	-0.2
1,786,544	-		SO1698	0.88	+1.4
1,786,548	+		SO1698	0.89	-1.0
1,786,550	-		SO1698	0.89	-1.2
1,786,555	-				-3.8
1,786,566	+				+0.2
1,786,566	+				+0.6
1,786,567	+				-0.3
1,786,573	+				+0.6
1,786,573	+				-1.7
1,786,573	+				+0.9
1,786,573	+				+0.3
1,786,573	+				-2.8
1,786,573	+				-3.8
1,786,573	+				+1.4
1,786,573	+				+0.7
1,786,573	+				-2.9
1,786,573	+				-2.1
1,786,573	+				+0.4
1,786,574	-				-1.1
1,786,574	-				+0.7
1,786,574	-				+2.5
1,786,574	-				+0.8
1,786,575	-				+0.9
1,786,575	-				-0.8
1,786,575	-				+0.5
1,786,575	-				-2.2
1,786,576	-				+0.6
1,786,581	-				-0.6
1,786,581	-				-1.8
1,786,581	-				-0.7
1,786,581	-				+0.4
1,786,581	-				-0.1
1,786,581	-				+0.3
1,786,581	-				-0.1
1,786,581	-				-2.4
1,786,588	+				-2.0
1,786,588	+				-2.4
1,786,588	+				+0.2
1,786,588	+				+0.8
1,786,588	+				+0.6
1,786,596	-				+1.8
1,786,596	-				-1.1
1,786,596	-				+0.8
1,786,596	-				-1.4
1,786,596	-				-3.2
1,786,596	-				+0.1
1,786,667	+				+0.2
1,786,675	-				+0.3
1,786,680	+				-0.3
1,786,680	+				-1.8
1,786,680	+				-0.0
1,786,682	+				+1.7
1,786,683	-				-0.1
1,786,688	-				+0.4
1,786,688	-				-0.2
1,786,688	-				-2.4
1,786,688	-				-1.7
1,786,697	+				+1.2
1,786,698	+				-1.1
1,786,698	+				+3.5
1,786,698	+				-2.5
1,786,705	+				+1.6
1,786,705	-				-0.2
1,786,705	-				+0.0
1,786,705	-				-0.5
1,786,706	-				-2.7
1,786,706	-				-2.4
1,786,713	+				-0.5
1,786,713	+				-0.0
1,786,713	-				-2.5
1,786,713	-				+0.8
1,786,780	-				+0.1
1,786,780	-				+0.3
1,786,808	+				-2.0
1,786,808	+				+0.0
1,786,914	+				-0.7
1,786,914	+				-0.5
1,786,914	+				+0.6
1,786,914	+				-0.2
1,786,914	+				-1.0
1,786,914	+				-2.1
1,786,914	+				+0.7
1,786,922	-				+0.1
1,786,922	-				-0.8
1,786,922	-				-0.8
1,786,967	+		SO1699	0.11	+1.4
1,787,016	-		SO1699	0.13	-0.1
1,787,060	+		SO1699	0.14	+0.8
1,787,068	-		SO1699	0.14	+1.2
1,787,161	-		SO1699	0.17	+0.1
1,787,168	-		SO1699	0.17	+0.1
1,787,171	+		SO1699	0.17	-1.0
1,787,181	+		SO1699	0.18	+1.5
1,787,181	+		SO1699	0.18	+0.7
1,787,189	-		SO1699	0.18	+0.0
1,787,191	-		SO1699	0.18	-1.0
1,787,193	+		SO1699	0.18	+0.8
1,787,198	+		SO1699	0.18	-1.1
1,787,198	+		SO1699	0.18	+1.7
1,787,198	+		SO1699	0.18	+0.0
1,787,199	-		SO1699	0.18	-1.1
1,787,206	-		SO1699	0.18	+0.4
1,787,210	-		SO1699	0.19	-1.5
1,787,210	-		SO1699	0.19	+0.5
1,787,212	-		SO1699	0.19	+0.4
1,787,213	+		SO1699	0.19	+1.2
1,787,213	+		SO1699	0.19	+0.1
1,787,214	+		SO1699	0.19	-0.3
1,787,214	+		SO1699	0.19	+0.2
1,787,214	+		SO1699	0.19	+0.4
1,787,215	+		SO1699	0.19	+0.4
1,787,215	+		SO1699	0.19	-1.3
1,787,220	-		SO1699	0.19	+1.9
1,787,221	-		SO1699	0.19	+1.1
1,787,221	-		SO1699	0.19	-0.2
1,787,221	-		SO1699	0.19	+1.8
1,787,223	-		SO1699	0.19	+1.8
1,787,223	-		SO1699	0.19	+0.4
1,787,223	-		SO1699	0.19	-0.3
1,787,242	+		SO1699	0.20	-0.9
1,787,243	+		SO1699	0.20	+1.0
1,787,243	+		SO1699	0.20	-1.4
1,787,250	-		SO1699	0.20	+1.8
1,787,251	-		SO1699	0.20	+0.1
1,787,251	-		SO1699	0.20	+0.0
1,787,251	-		SO1699	0.20	-0.1
1,787,251	-		SO1699	0.20	+0.4
1,787,252	-		SO1699	0.20	-0.3
1,787,302	-		SO1699	0.21	+0.6
1,787,302	-		SO1699	0.21	+0.3
1,787,304	+		SO1699	0.21	+1.1
1,787,306	+		SO1699	0.21	-0.9
1,787,311	+		SO1699	0.22	-0.1
1,787,314	-		SO1699	0.22	-2.5
1,787,314	-		SO1699	0.22	-0.8
1,787,314	-		SO1699	0.22	+0.2
1,787,346	+		SO1699	0.23	-0.7
1,787,346	+		SO1699	0.23	-0.6
1,787,354	-		SO1699	0.23	-0.7
1,787,354	-		SO1699	0.23	+1.2
1,787,356	+		SO1699	0.23	-0.6
1,787,356	+		SO1699	0.23	-0.1
1,787,356	+		SO1699	0.23	-1.2
1,787,356	+		SO1699	0.23	-0.5
1,787,358	+		SO1699	0.23	-1.7
1,787,359	-		SO1699	0.23	+1.1
1,787,364	-		SO1699	0.23	-0.5
1,787,364	-		SO1699	0.23	+0.2
1,787,364	-		SO1699	0.23	+0.5
1,787,368	+		SO1699	0.23	+0.5
1,787,368	-		SO1699	0.23	-1.8
1,787,371	+		SO1699	0.24	+0.3
1,787,377	+		SO1699	0.24	+0.3
1,787,390	+		SO1699	0.24	-1.3
1,787,403	+		SO1699	0.25	-2.4
1,787,430	+		SO1699	0.25	+0.3
1,787,430	+		SO1699	0.25	+0.9
1,787,430	+		SO1699	0.25	-2.8
1,787,430	+		SO1699	0.25	+0.4
1,787,438	-		SO1699	0.26	-2.2
1,787,444	-		SO1699	0.26	-0.4
1,787,484	-		SO1699	0.27	+2.1
1,787,484	-		SO1699	0.27	-3.2
1,787,484	-		SO1699	0.27	-0.3
1,787,500	+		SO1699	0.28	+0.2
1,787,506	+		SO1699	0.28	+1.5
1,787,507	+		SO1699	0.28	-0.5
1,787,516	+		SO1699	0.28	-4.2
1,787,516	+		SO1699	0.28	-1.5
1,787,516	+		SO1699	0.28	-2.5
1,787,524	-		SO1699	0.28	-2.1
1,787,548	-		SO1699	0.29	+0.4
1,787,580	+		SO1699	0.30	-3.5
1,787,582	+		SO1699	0.30	+1.6