Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26865 and BWI76_RS26870 overlap by 4 nucleotides BWI76_RS26870 and BWI76_RS26875 are separated by 10 nucleotides BWI76_RS26875 and BWI76_RS26880 are separated by 9 nucleotides
BWI76_RS26865: BWI76_RS26865 - dipeptide ABC transporter ATP-binding protein, at 5,573,511 to 5,574,524
_RS26865
BWI76_RS26870: BWI76_RS26870 - dipeptide ABC transporter ATP-binding protein, at 5,574,521 to 5,575,504
_RS26870
BWI76_RS26875: BWI76_RS26875 - dipeptide ABC transporter permease DppC, at 5,575,515 to 5,576,417
_RS26875
BWI76_RS26880: BWI76_RS26880 - dipeptide ABC transporter permease DppB, at 5,576,427 to 5,577,446
_RS26880
Position (kb) 5574
5575
5576 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5573.522 kb on - strand at 5573.522 kb on - strand at 5573.522 kb on - strand at 5573.575 kb on + strand at 5573.605 kb on - strand at 5573.611 kb on - strand at 5573.729 kb on + strand, within BWI76_RS26865 at 5573.734 kb on + strand, within BWI76_RS26865 at 5573.734 kb on + strand, within BWI76_RS26865 at 5573.752 kb on - strand, within BWI76_RS26865 at 5573.778 kb on + strand, within BWI76_RS26865 at 5573.806 kb on - strand, within BWI76_RS26865 at 5573.888 kb on + strand, within BWI76_RS26865 at 5573.941 kb on + strand, within BWI76_RS26865 at 5573.993 kb on + strand, within BWI76_RS26865 at 5574.085 kb on - strand, within BWI76_RS26865 at 5574.119 kb on + strand, within BWI76_RS26865 at 5574.122 kb on - strand, within BWI76_RS26865 at 5574.139 kb on - strand, within BWI76_RS26865 at 5574.207 kb on + strand, within BWI76_RS26865 at 5574.364 kb on + strand, within BWI76_RS26865 at 5574.416 kb on - strand, within BWI76_RS26865 at 5574.462 kb on - strand at 5574.491 kb on - strand at 5574.494 kb on + strand at 5574.579 kb on + strand at 5574.603 kb on - strand at 5574.719 kb on - strand, within BWI76_RS26870 at 5574.920 kb on - strand, within BWI76_RS26870 at 5575.027 kb on + strand, within BWI76_RS26870 at 5575.061 kb on - strand, within BWI76_RS26870 at 5575.193 kb on - strand, within BWI76_RS26870 at 5575.242 kb on + strand, within BWI76_RS26870 at 5575.290 kb on - strand, within BWI76_RS26870 at 5575.411 kb on + strand at 5575.411 kb on + strand at 5575.526 kb on + strand at 5575.550 kb on + strand at 5575.565 kb on + strand at 5575.667 kb on + strand, within BWI76_RS26875 at 5575.766 kb on + strand, within BWI76_RS26875 at 5575.868 kb on + strand, within BWI76_RS26875 at 5576.093 kb on + strand, within BWI76_RS26875 at 5576.093 kb on + strand, within BWI76_RS26875 at 5576.310 kb on - strand at 5576.458 kb on - strand at 5576.469 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 5,573,522 - -0.2 5,573,522 - -0.3 5,573,522 - -0.4 5,573,575 + +1.5 5,573,605 - -0.3 5,573,611 - +1.0 5,573,729 + BWI76_RS26865 0.21 +0.8 5,573,734 + BWI76_RS26865 0.22 +1.2 5,573,734 + BWI76_RS26865 0.22 -0.2 5,573,752 - BWI76_RS26865 0.24 +1.3 5,573,778 + BWI76_RS26865 0.26 -0.9 5,573,806 - BWI76_RS26865 0.29 +0.5 5,573,888 + BWI76_RS26865 0.37 +0.6 5,573,941 + BWI76_RS26865 0.42 -0.2 5,573,993 + BWI76_RS26865 0.48 -0.2 5,574,085 - BWI76_RS26865 0.57 +0.5 5,574,119 + BWI76_RS26865 0.60 +2.0 5,574,122 - BWI76_RS26865 0.60 +1.0 5,574,139 - BWI76_RS26865 0.62 +0.5 5,574,207 + BWI76_RS26865 0.69 +0.0 5,574,364 + BWI76_RS26865 0.84 +1.4 5,574,416 - BWI76_RS26865 0.89 -0.4 5,574,462 - -0.1 5,574,491 - +0.4 5,574,494 + -0.1 5,574,579 + -0.1 5,574,603 - -0.0 5,574,719 - BWI76_RS26870 0.20 +1.4 5,574,920 - BWI76_RS26870 0.41 +1.3 5,575,027 + BWI76_RS26870 0.51 +0.6 5,575,061 - BWI76_RS26870 0.55 +1.2 5,575,193 - BWI76_RS26870 0.68 +0.3 5,575,242 + BWI76_RS26870 0.73 +2.3 5,575,290 - BWI76_RS26870 0.78 -0.6 5,575,411 + -0.3 5,575,411 + +0.2 5,575,526 + -0.2 5,575,550 + +0.2 5,575,565 + -0.6 5,575,667 + BWI76_RS26875 0.17 +0.0 5,575,766 + BWI76_RS26875 0.28 +0.2 5,575,868 + BWI76_RS26875 0.39 +0.4 5,576,093 + BWI76_RS26875 0.64 -2.0 5,576,093 + BWI76_RS26875 0.64 +1.0 5,576,310 - -1.3 5,576,458 - +0.6 5,576,469 - -0.0
Or see this region's nucleotide sequence