Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26755

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26750 and BWI76_RS26755 are separated by 183 nucleotidesBWI76_RS26755 and BWI76_RS26760 are separated by 221 nucleotides BWI76_RS26750: BWI76_RS26750 - PfkB domain-containing protein, at 5,539,645 to 5,540,580 _RS26750 BWI76_RS26755: BWI76_RS26755 - peptidase M16, at 5,540,764 to 5,542,269 _RS26755 BWI76_RS26760: BWI76_RS26760 - C4-dicarboxylate transport protein DctA (from data), at 5,542,491 to 5,543,777 _RS26760 Position (kb) 5540 5541 5542 5543Strain fitness (log2 ratio) -2 -1 0 1 2at 5539.900 kb on + strand, within BWI76_RS26750at 5539.900 kb on + strand, within BWI76_RS26750at 5540.003 kb on - strand, within BWI76_RS26750at 5540.009 kb on + strand, within BWI76_RS26750at 5540.024 kb on - strand, within BWI76_RS26750at 5540.295 kb on - strand, within BWI76_RS26750at 5540.295 kb on - strand, within BWI76_RS26750at 5540.635 kb on + strandat 5540.697 kb on + strandat 5540.941 kb on - strand, within BWI76_RS26755at 5541.095 kb on - strand, within BWI76_RS26755at 5541.284 kb on - strand, within BWI76_RS26755at 5541.292 kb on + strand, within BWI76_RS26755at 5541.426 kb on + strand, within BWI76_RS26755at 5541.434 kb on - strand, within BWI76_RS26755at 5541.484 kb on - strand, within BWI76_RS26755at 5541.620 kb on - strand, within BWI76_RS26755at 5541.951 kb on + strand, within BWI76_RS26755at 5541.961 kb on - strand, within BWI76_RS26755at 5541.987 kb on - strand, within BWI76_RS26755at 5541.987 kb on - strand, within BWI76_RS26755at 5541.987 kb on - strand, within BWI76_RS26755at 5542.097 kb on - strand, within BWI76_RS26755at 5542.134 kb on - strandat 5542.134 kb on - strandat 5542.211 kb on - strandat 5542.270 kb on - strandat 5542.359 kb on - strandat 5542.413 kb on - strandat 5542.531 kb on - strandat 5542.561 kb on - strandat 5542.568 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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5,539,900 + BWI76_RS26750 0.27 -2.2
5,539,900 + BWI76_RS26750 0.27 +0.2
5,540,003 - BWI76_RS26750 0.38 +0.3
5,540,009 + BWI76_RS26750 0.39 -0.2
5,540,024 - BWI76_RS26750 0.40 -1.0
5,540,295 - BWI76_RS26750 0.69 -0.8
5,540,295 - BWI76_RS26750 0.69 -0.0
5,540,635 + +0.0
5,540,697 + -0.6
5,540,941 - BWI76_RS26755 0.12 +0.7
5,541,095 - BWI76_RS26755 0.22 +2.0
5,541,284 - BWI76_RS26755 0.35 +0.9
5,541,292 + BWI76_RS26755 0.35 +0.5
5,541,426 + BWI76_RS26755 0.44 +0.4
5,541,434 - BWI76_RS26755 0.44 -0.8
5,541,484 - BWI76_RS26755 0.48 +1.4
5,541,620 - BWI76_RS26755 0.57 +0.8
5,541,951 + BWI76_RS26755 0.79 +0.2
5,541,961 - BWI76_RS26755 0.79 -0.4
5,541,987 - BWI76_RS26755 0.81 +0.9
5,541,987 - BWI76_RS26755 0.81 +1.4
5,541,987 - BWI76_RS26755 0.81 +0.9
5,542,097 - BWI76_RS26755 0.89 +0.8
5,542,134 - +1.0
5,542,134 - +0.9
5,542,211 - +0.7
5,542,270 - +1.0
5,542,359 - +2.0
5,542,413 - -0.8
5,542,531 - +0.7
5,542,561 - -0.3
5,542,568 + +0.6

Or see this region's nucleotide sequence