Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26580

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26570 and BWI76_RS26575 are separated by 68 nucleotidesBWI76_RS26575 and BWI76_RS26580 are separated by 380 nucleotidesBWI76_RS26580 and BWI76_RS26585 are separated by 262 nucleotides BWI76_RS26570: BWI76_RS26570 - anion permease, at 5,500,102 to 5,501,598 _RS26570 BWI76_RS26575: BWI76_RS26575 - universal stress protein B, at 5,501,667 to 5,502,002 _RS26575 BWI76_RS26580: BWI76_RS26580 - universal stress protein A, at 5,502,383 to 5,502,820 _RS26580 BWI76_RS26585: BWI76_RS26585 - MFS transporter, at 5,503,083 to 5,504,555 _RS26585 Position (kb) 5502 5503Strain fitness (log2 ratio) -2 -1 0 1at 5501.579 kb on - strandat 5501.796 kb on - strand, within BWI76_RS26575at 5501.796 kb on - strand, within BWI76_RS26575at 5501.808 kb on - strand, within BWI76_RS26575at 5501.814 kb on - strand, within BWI76_RS26575at 5501.826 kb on - strand, within BWI76_RS26575at 5501.974 kb on + strandat 5501.974 kb on + strandat 5501.974 kb on + strandat 5501.982 kb on - strandat 5501.982 kb on - strandat 5502.005 kb on - strandat 5502.043 kb on - strandat 5502.077 kb on + strandat 5502.077 kb on + strandat 5502.085 kb on - strandat 5502.090 kb on + strandat 5502.161 kb on + strandat 5502.161 kb on + strandat 5502.283 kb on + strandat 5502.283 kb on + strandat 5502.291 kb on - strandat 5502.291 kb on - strandat 5502.344 kb on + strandat 5502.352 kb on - strandat 5502.381 kb on - strandat 5502.381 kb on - strandat 5502.381 kb on - strandat 5502.408 kb on + strandat 5502.408 kb on + strandat 5502.416 kb on - strandat 5502.416 kb on - strandat 5502.416 kb on - strandat 5502.469 kb on + strand, within BWI76_RS26580at 5502.482 kb on - strand, within BWI76_RS26580at 5502.485 kb on + strand, within BWI76_RS26580at 5502.508 kb on - strand, within BWI76_RS26580at 5502.515 kb on + strand, within BWI76_RS26580at 5502.609 kb on - strand, within BWI76_RS26580at 5502.627 kb on + strand, within BWI76_RS26580at 5502.703 kb on - strand, within BWI76_RS26580at 5502.739 kb on + strand, within BWI76_RS26580at 5502.760 kb on + strand, within BWI76_RS26580at 5502.770 kb on + strand, within BWI76_RS26580at 5502.928 kb on + strandat 5502.946 kb on - strandat 5502.985 kb on + strandat 5502.993 kb on + strandat 5503.001 kb on - strandat 5503.010 kb on + strandat 5503.051 kb on - strandat 5503.071 kb on - strandat 5503.268 kb on + strand, within BWI76_RS26585at 5503.277 kb on + strand, within BWI76_RS26585at 5503.453 kb on - strand, within BWI76_RS26585at 5503.606 kb on + strand, within BWI76_RS26585at 5503.606 kb on + strand, within BWI76_RS26585at 5503.614 kb on - strand, within BWI76_RS26585at 5503.614 kb on - strand, within BWI76_RS26585at 5503.692 kb on - strand, within BWI76_RS26585at 5503.759 kb on - strand, within BWI76_RS26585

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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5,501,579 - -1.4
5,501,796 - BWI76_RS26575 0.38 +0.3
5,501,796 - BWI76_RS26575 0.38 -0.8
5,501,808 - BWI76_RS26575 0.42 -1.8
5,501,814 - BWI76_RS26575 0.44 +0.8
5,501,826 - BWI76_RS26575 0.47 -0.2
5,501,974 + +0.6
5,501,974 + -0.0
5,501,974 + +1.6
5,501,982 - +0.6
5,501,982 - -0.7
5,502,005 - +0.4
5,502,043 - -0.8
5,502,077 + +1.0
5,502,077 + -1.0
5,502,085 - +0.5
5,502,090 + -0.0
5,502,161 + -0.2
5,502,161 + +0.1
5,502,283 + +0.2
5,502,283 + +1.0
5,502,291 - +0.9
5,502,291 - -0.0
5,502,344 + +0.3
5,502,352 - +0.5
5,502,381 - +0.8
5,502,381 - +0.4
5,502,381 - +0.5
5,502,408 + +0.5
5,502,408 + +1.2
5,502,416 - -0.1
5,502,416 - -0.0
5,502,416 - +1.0
5,502,469 + BWI76_RS26580 0.20 +0.6
5,502,482 - BWI76_RS26580 0.23 -0.0
5,502,485 + BWI76_RS26580 0.23 +1.7
5,502,508 - BWI76_RS26580 0.29 +1.3
5,502,515 + BWI76_RS26580 0.30 +0.0
5,502,609 - BWI76_RS26580 0.52 +0.7
5,502,627 + BWI76_RS26580 0.56 +1.0
5,502,703 - BWI76_RS26580 0.73 +0.3
5,502,739 + BWI76_RS26580 0.81 +1.0
5,502,760 + BWI76_RS26580 0.86 +0.8
5,502,770 + BWI76_RS26580 0.88 +0.5
5,502,928 + -1.4
5,502,946 - -0.0
5,502,985 + +0.1
5,502,993 + +1.5
5,503,001 - +0.5
5,503,010 + -0.1
5,503,051 - -0.0
5,503,071 - -0.2
5,503,268 + BWI76_RS26585 0.13 +0.8
5,503,277 + BWI76_RS26585 0.13 +0.3
5,503,453 - BWI76_RS26585 0.25 -1.1
5,503,606 + BWI76_RS26585 0.36 -1.7
5,503,606 + BWI76_RS26585 0.36 +1.0
5,503,614 - BWI76_RS26585 0.36 -0.6
5,503,614 - BWI76_RS26585 0.36 -0.0
5,503,692 - BWI76_RS26585 0.41 -0.8
5,503,759 - BWI76_RS26585 0.46 -0.6

Or see this region's nucleotide sequence