Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26260

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26255 and BWI76_RS26260 are separated by 232 nucleotidesBWI76_RS26260 and BWI76_RS26265 overlap by 26 nucleotidesBWI76_RS26265 and BWI76_RS26270 are separated by 42 nucleotidesBWI76_RS26270 and BWI76_RS26275 are separated by 50 nucleotides BWI76_RS26255: BWI76_RS26255 - oxidoreductase, at 5,435,560 to 5,436,597 _RS26255 BWI76_RS26260: BWI76_RS26260 - hypothetical protein, at 5,436,830 to 5,437,468 _RS26260 BWI76_RS26265: BWI76_RS26265 - hypothetical protein, at 5,437,443 to 5,437,673 _RS26265 BWI76_RS26270: BWI76_RS26270 - N-acetyltransferase, at 5,437,716 to 5,438,207 _RS26270 BWI76_RS26275: BWI76_RS26275 - gamma-glutamyltransferase, at 5,438,258 to 5,440,000 _RS26275 Position (kb) 5436 5437 5438Strain fitness (log2 ratio) -1 0 1 2at 5435.878 kb on - strand, within BWI76_RS26255at 5435.936 kb on + strand, within BWI76_RS26255at 5435.948 kb on + strand, within BWI76_RS26255at 5436.000 kb on + strand, within BWI76_RS26255at 5436.011 kb on + strand, within BWI76_RS26255at 5436.068 kb on - strand, within BWI76_RS26255at 5436.091 kb on + strand, within BWI76_RS26255at 5436.310 kb on - strand, within BWI76_RS26255at 5436.412 kb on + strand, within BWI76_RS26255at 5436.448 kb on + strand, within BWI76_RS26255at 5436.586 kb on + strandat 5436.618 kb on + strandat 5436.660 kb on - strandat 5436.731 kb on - strandat 5436.803 kb on + strandat 5436.868 kb on + strandat 5436.946 kb on - strand, within BWI76_RS26260at 5437.050 kb on - strand, within BWI76_RS26260at 5437.094 kb on - strand, within BWI76_RS26260at 5437.123 kb on + strand, within BWI76_RS26260at 5437.220 kb on - strand, within BWI76_RS26260at 5437.335 kb on - strand, within BWI76_RS26260at 5437.736 kb on - strandat 5437.875 kb on - strand, within BWI76_RS26270at 5437.894 kb on + strand, within BWI76_RS26270at 5437.929 kb on - strand, within BWI76_RS26270at 5437.936 kb on - strand, within BWI76_RS26270at 5437.990 kb on + strand, within BWI76_RS26270at 5438.044 kb on - strand, within BWI76_RS26270at 5438.074 kb on + strand, within BWI76_RS26270at 5438.182 kb on + strandat 5438.212 kb on + strandat 5438.227 kb on - strandat 5438.248 kb on - strandat 5438.256 kb on + strandat 5438.264 kb on - strandat 5438.264 kb on - strandat 5438.264 kb on - strandat 5438.309 kb on - strandat 5438.309 kb on - strandat 5438.337 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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5,435,878 - BWI76_RS26255 0.31 -0.1
5,435,936 + BWI76_RS26255 0.36 +1.4
5,435,948 + BWI76_RS26255 0.37 +0.0
5,436,000 + BWI76_RS26255 0.42 +1.7
5,436,011 + BWI76_RS26255 0.43 +0.4
5,436,068 - BWI76_RS26255 0.49 +0.7
5,436,091 + BWI76_RS26255 0.51 -0.1
5,436,310 - BWI76_RS26255 0.72 +0.7
5,436,412 + BWI76_RS26255 0.82 -0.1
5,436,448 + BWI76_RS26255 0.86 +0.3
5,436,586 + -1.5
5,436,618 + -0.2
5,436,660 - -0.3
5,436,731 - +0.6
5,436,803 + +0.2
5,436,868 + +0.4
5,436,946 - BWI76_RS26260 0.18 +1.6
5,437,050 - BWI76_RS26260 0.34 -1.4
5,437,094 - BWI76_RS26260 0.41 +0.4
5,437,123 + BWI76_RS26260 0.46 +2.5
5,437,220 - BWI76_RS26260 0.61 +0.4
5,437,335 - BWI76_RS26260 0.79 +0.5
5,437,736 - +0.2
5,437,875 - BWI76_RS26270 0.32 +0.3
5,437,894 + BWI76_RS26270 0.36 -0.1
5,437,929 - BWI76_RS26270 0.43 +1.3
5,437,936 - BWI76_RS26270 0.45 -0.1
5,437,990 + BWI76_RS26270 0.56 +0.7
5,438,044 - BWI76_RS26270 0.67 -0.2
5,438,074 + BWI76_RS26270 0.73 +1.4
5,438,182 + -0.2
5,438,212 + +0.2
5,438,227 - -1.1
5,438,248 - +1.1
5,438,256 + -1.3
5,438,264 - +0.2
5,438,264 - -0.3
5,438,264 - +0.7
5,438,309 - +0.1
5,438,309 - +0.2
5,438,337 - -0.2

Or see this region's nucleotide sequence