Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23860 and BWI76_RS23865 are separated by 186 nucleotides BWI76_RS23865 and BWI76_RS23870 are separated by 60 nucleotides BWI76_RS23870 and BWI76_RS23875 are separated by 144 nucleotides BWI76_RS23875 and BWI76_RS23880 are separated by 22 nucleotides
BWI76_RS23860: BWI76_RS23860 - protein disulfide oxidoreductase, at 4,978,989 to 4,979,480
_RS23860
BWI76_RS23865: BWI76_RS23865 - NAD(P)-dependent oxidoreductase, at 4,979,667 to 4,980,410
_RS23865
BWI76_RS23870: BWI76_RS23870 - Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) <small>(from data)</small>, at 4,980,471 to 4,983,344
_RS23870
BWI76_RS23875: BWI76_RS23875 - glycine cleavage system protein H, at 4,983,489 to 4,983,878
_RS23875
BWI76_RS23880: BWI76_RS23880 - Aminomethyltransferase (EC 2.1.2.10) <small>(from data)</small>, at 4,983,901 to 4,984,995
_RS23880
Position (kb) 4980
4981
4982
4983
4984 Strain fitness (log2 ratio) -1
0
1 at 4979.524 kb on + strand at 4979.556 kb on - strand at 4979.580 kb on + strand at 4979.590 kb on + strand at 4979.598 kb on - strand at 4979.606 kb on - strand at 4979.844 kb on + strand, within BWI76_RS23865 at 4980.004 kb on + strand, within BWI76_RS23865 at 4980.012 kb on - strand, within BWI76_RS23865 at 4980.038 kb on + strand, within BWI76_RS23865 at 4980.154 kb on + strand, within BWI76_RS23865 at 4980.162 kb on - strand, within BWI76_RS23865 at 4980.213 kb on + strand, within BWI76_RS23865 at 4980.309 kb on - strand, within BWI76_RS23865 at 4980.309 kb on - strand, within BWI76_RS23865 at 4980.339 kb on - strand at 4980.564 kb on + strand at 4980.778 kb on - strand, within BWI76_RS23870 at 4981.058 kb on + strand, within BWI76_RS23870 at 4981.219 kb on + strand, within BWI76_RS23870 at 4981.236 kb on - strand, within BWI76_RS23870 at 4981.273 kb on + strand, within BWI76_RS23870 at 4981.679 kb on + strand, within BWI76_RS23870 at 4981.905 kb on + strand, within BWI76_RS23870 at 4981.989 kb on - strand, within BWI76_RS23870 at 4982.075 kb on + strand, within BWI76_RS23870 at 4982.133 kb on - strand, within BWI76_RS23870 at 4982.162 kb on + strand, within BWI76_RS23870 at 4982.182 kb on - strand, within BWI76_RS23870 at 4982.185 kb on - strand, within BWI76_RS23870 at 4982.395 kb on + strand, within BWI76_RS23870 at 4982.405 kb on + strand, within BWI76_RS23870 at 4982.408 kb on - strand, within BWI76_RS23870 at 4982.410 kb on + strand, within BWI76_RS23870 at 4982.529 kb on + strand, within BWI76_RS23870 at 4982.685 kb on - strand, within BWI76_RS23870 at 4983.048 kb on - strand, within BWI76_RS23870 at 4983.084 kb on - strand at 4983.250 kb on + strand at 4983.269 kb on + strand at 4983.334 kb on - strand at 4983.461 kb on + strand at 4983.608 kb on + strand, within BWI76_RS23875 at 4983.608 kb on + strand, within BWI76_RS23875 at 4983.616 kb on - strand at 4983.616 kb on - strand, within BWI76_RS23875 at 4983.719 kb on + strand, within BWI76_RS23875 at 4983.737 kb on + strand, within BWI76_RS23875 at 4984.179 kb on + strand, within BWI76_RS23880 at 4984.294 kb on + strand, within BWI76_RS23880
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 4,979,524 + -0.9 4,979,556 - -0.9 4,979,580 + +0.2 4,979,590 + +0.7 4,979,598 - -0.7 4,979,606 - +0.3 4,979,844 + BWI76_RS23865 0.24 -0.2 4,980,004 + BWI76_RS23865 0.45 -0.6 4,980,012 - BWI76_RS23865 0.46 +0.4 4,980,038 + BWI76_RS23865 0.50 -0.4 4,980,154 + BWI76_RS23865 0.65 +1.3 4,980,162 - BWI76_RS23865 0.67 +0.1 4,980,213 + BWI76_RS23865 0.73 -0.5 4,980,309 - BWI76_RS23865 0.86 -0.1 4,980,309 - BWI76_RS23865 0.86 +0.6 4,980,339 - +0.5 4,980,564 + +0.4 4,980,778 - BWI76_RS23870 0.11 +0.1 4,981,058 + BWI76_RS23870 0.20 +0.7 4,981,219 + BWI76_RS23870 0.26 +0.3 4,981,236 - BWI76_RS23870 0.27 +1.4 4,981,273 + BWI76_RS23870 0.28 +1.2 4,981,679 + BWI76_RS23870 0.42 +0.2 4,981,905 + BWI76_RS23870 0.50 +0.3 4,981,989 - BWI76_RS23870 0.53 +0.5 4,982,075 + BWI76_RS23870 0.56 +0.2 4,982,133 - BWI76_RS23870 0.58 +1.3 4,982,162 + BWI76_RS23870 0.59 +0.3 4,982,182 - BWI76_RS23870 0.60 +0.3 4,982,185 - BWI76_RS23870 0.60 -0.8 4,982,395 + BWI76_RS23870 0.67 -1.1 4,982,405 + BWI76_RS23870 0.67 +1.3 4,982,408 - BWI76_RS23870 0.67 +0.3 4,982,410 + BWI76_RS23870 0.67 +0.3 4,982,529 + BWI76_RS23870 0.72 +0.9 4,982,685 - BWI76_RS23870 0.77 +0.6 4,983,048 - BWI76_RS23870 0.90 +0.2 4,983,084 - +0.9 4,983,250 + +0.2 4,983,269 + +0.9 4,983,334 - +0.2 4,983,461 + +0.7 4,983,608 + BWI76_RS23875 0.31 +1.0 4,983,608 + BWI76_RS23875 0.31 +0.5 4,983,616 - +1.4 4,983,616 - BWI76_RS23875 0.33 +0.2 4,983,719 + BWI76_RS23875 0.59 +0.6 4,983,737 + BWI76_RS23875 0.64 +0.6 4,984,179 + BWI76_RS23880 0.25 +1.4 4,984,294 + BWI76_RS23880 0.36 +0.4
Or see this region's nucleotide sequence