Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23705

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23700 and BWI76_RS23705 are separated by 2 nucleotidesBWI76_RS23705 and BWI76_RS23710 are separated by 11 nucleotides BWI76_RS23700: BWI76_RS23700 - glycerate CoA-transferase (from data), at 4,946,698 to 4,948,299 _RS23700 BWI76_RS23705: BWI76_RS23705 - 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data), at 4,948,302 to 4,949,036 _RS23705 BWI76_RS23710: BWI76_RS23710 - 3-keto-2-deoxy-D-ribonyl-CoA thiolase (from data), at 4,949,048 to 4,950,238 _RS23710 Position (kb) 4948 4949 4950Strain fitness (log2 ratio) -1 0 1at 4947.527 kb on + strand, within BWI76_RS23700at 4947.527 kb on + strand, within BWI76_RS23700at 4947.535 kb on - strand, within BWI76_RS23700at 4947.686 kb on - strand, within BWI76_RS23700at 4947.728 kb on + strand, within BWI76_RS23700at 4947.760 kb on + strand, within BWI76_RS23700at 4947.808 kb on - strand, within BWI76_RS23700at 4948.120 kb on + strand, within BWI76_RS23700at 4948.368 kb on - strandat 4948.502 kb on + strand, within BWI76_RS23705at 4948.657 kb on + strand, within BWI76_RS23705at 4949.140 kb on + strandat 4949.173 kb on - strand, within BWI76_RS23710at 4949.429 kb on - strand, within BWI76_RS23710at 4949.480 kb on + strand, within BWI76_RS23710at 4949.754 kb on - strand, within BWI76_RS23710at 4949.876 kb on + strand, within BWI76_RS23710at 4950.029 kb on + strand, within BWI76_RS23710

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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4,947,527 + BWI76_RS23700 0.52 +0.3
4,947,527 + BWI76_RS23700 0.52 +0.6
4,947,535 - BWI76_RS23700 0.52 -0.3
4,947,686 - BWI76_RS23700 0.62 -0.3
4,947,728 + BWI76_RS23700 0.64 -0.4
4,947,760 + BWI76_RS23700 0.66 -0.2
4,947,808 - BWI76_RS23700 0.69 +0.3
4,948,120 + BWI76_RS23700 0.89 -0.1
4,948,368 - +0.4
4,948,502 + BWI76_RS23705 0.27 +0.3
4,948,657 + BWI76_RS23705 0.48 +1.6
4,949,140 + -0.6
4,949,173 - BWI76_RS23710 0.10 +0.4
4,949,429 - BWI76_RS23710 0.32 -0.5
4,949,480 + BWI76_RS23710 0.36 +0.3
4,949,754 - BWI76_RS23710 0.59 -0.7
4,949,876 + BWI76_RS23710 0.70 -0.4
4,950,029 + BWI76_RS23710 0.82 +0.5

Or see this region's nucleotide sequence