Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23010 and BWI76_RS23015 overlap by 4 nucleotides BWI76_RS23015 and BWI76_RS23020 are separated by 8 nucleotides BWI76_RS23020 and BWI76_RS23025 overlap by 14 nucleotides BWI76_RS23025 and BWI76_RS23030 are separated by 1 nucleotides
BWI76_RS23010: BWI76_RS23010 - cobyric acid synthase CobQ, at 4,800,515 to 4,802,038
_RS23010
BWI76_RS23015: BWI76_RS23015 - cobalt transporter ATP-binding subunit, at 4,802,035 to 4,802,850
_RS23015
BWI76_RS23020: BWI76_RS23020 - cobalamin biosynthesis protein CbiQ, at 4,802,859 to 4,803,536
_RS23020
BWI76_RS23025: BWI76_RS23025 - cobalt ABC transporter substrate-binding protein CbiN, at 4,803,523 to 4,803,804
_RS23025
BWI76_RS23030: BWI76_RS23030 - cobalamin biosynthesis protein CbiM, at 4,803,806 to 4,804,543
_RS23030
Position (kb)
4802
4803
4804 Strain fitness (log2 ratio)
-1
0
1 at 4801.871 kb on + strand, within BWI76_RS23010 at 4802.113 kb on - strand at 4802.288 kb on + strand, within BWI76_RS23015 at 4802.858 kb on - strand at 4802.875 kb on + strand at 4802.875 kb on + strand at 4803.106 kb on + strand, within BWI76_RS23020 at 4803.114 kb on - strand, within BWI76_RS23020 at 4803.392 kb on - strand, within BWI76_RS23020 at 4803.606 kb on - strand, within BWI76_RS23025 at 4803.768 kb on - strand, within BWI76_RS23025 at 4804.086 kb on - strand, within BWI76_RS23030 at 4804.305 kb on + strand, within BWI76_RS23030 at 4804.429 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 4,801,871 + BWI76_RS23010 0.89 +0.4 4,802,113 - +0.1 4,802,288 + BWI76_RS23015 0.31 +0.1 4,802,858 - +0.2 4,802,875 + -0.8 4,802,875 + -0.2 4,803,106 + BWI76_RS23020 0.36 +1.6 4,803,114 - BWI76_RS23020 0.38 +0.4 4,803,392 - BWI76_RS23020 0.79 +1.2 4,803,606 - BWI76_RS23025 0.29 -0.2 4,803,768 - BWI76_RS23025 0.87 -0.1 4,804,086 - BWI76_RS23030 0.38 +0.1 4,804,305 + BWI76_RS23030 0.68 -0.3 4,804,429 + +1.4
Or see this region's nucleotide sequence