Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21245

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS21240 and BWI76_RS21245 are separated by 91 nucleotidesBWI76_RS21245 and BWI76_RS21250 are separated by 65 nucleotides BWI76_RS21240: BWI76_RS21240 - flavohemoprotein, at 4,447,201 to 4,448,391 _RS21240 BWI76_RS21245: BWI76_RS21245 - nitrogen regulatory protein P-II, at 4,448,483 to 4,448,821 _RS21245 BWI76_RS21250: BWI76_RS21250 - two-component system response regulator GlrR, at 4,448,887 to 4,450,224 _RS21250 Position (kb) 4448 4449Strain fitness (log2 ratio) -1 0 1 2at 4447.584 kb on - strand, within BWI76_RS21240at 4447.854 kb on - strand, within BWI76_RS21240at 4448.039 kb on - strand, within BWI76_RS21240at 4448.094 kb on - strand, within BWI76_RS21240at 4448.109 kb on - strand, within BWI76_RS21240at 4448.201 kb on - strand, within BWI76_RS21240at 4448.557 kb on - strand, within BWI76_RS21245at 4448.578 kb on + strand, within BWI76_RS21245at 4448.581 kb on - strand, within BWI76_RS21245at 4448.725 kb on - strand, within BWI76_RS21245at 4448.887 kb on - strandat 4448.892 kb on + strandat 4448.989 kb on - strandat 4449.382 kb on - strand, within BWI76_RS21250at 4449.451 kb on + strand, within BWI76_RS21250

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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4,447,584 - BWI76_RS21240 0.32 -0.0
4,447,854 - BWI76_RS21240 0.55 -1.0
4,448,039 - BWI76_RS21240 0.70 -0.1
4,448,094 - BWI76_RS21240 0.75 +0.7
4,448,109 - BWI76_RS21240 0.76 -0.5
4,448,201 - BWI76_RS21240 0.84 -0.3
4,448,557 - BWI76_RS21245 0.22 +0.1
4,448,578 + BWI76_RS21245 0.28 +0.4
4,448,581 - BWI76_RS21245 0.29 +2.4
4,448,725 - BWI76_RS21245 0.71 +0.6
4,448,887 - -0.5
4,448,892 + -0.9
4,448,989 - -0.6
4,449,382 - BWI76_RS21250 0.37 +0.8
4,449,451 + BWI76_RS21250 0.42 -0.6

Or see this region's nucleotide sequence