Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19605

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19595 and BWI76_RS19600 are separated by 121 nucleotidesBWI76_RS19600 and BWI76_RS19605 overlap by 4 nucleotidesBWI76_RS19605 and BWI76_RS19610 are separated by 127 nucleotides BWI76_RS19595: BWI76_RS19595 - hypothetical protein, at 4,096,905 to 4,097,822 _RS19595 BWI76_RS19600: BWI76_RS19600 - hypothetical protein, at 4,097,944 to 4,098,342 _RS19600 BWI76_RS19605: BWI76_RS19605 - CidB/LrgB family autolysis modulator, at 4,098,339 to 4,099,034 _RS19605 BWI76_RS19610: BWI76_RS19610 - Cytidine deaminase (EC 3.5.4.5) (from data), at 4,099,162 to 4,100,046 _RS19610 Position (kb) 4098 4099 4100Strain fitness (log2 ratio) -1 0 1at 4097.414 kb on - strand, within BWI76_RS19595at 4097.477 kb on - strand, within BWI76_RS19595at 4097.555 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.672 kb on + strand, within BWI76_RS19595at 4097.680 kb on - strand, within BWI76_RS19595at 4097.690 kb on - strand, within BWI76_RS19595at 4097.726 kb on + strand, within BWI76_RS19595at 4097.770 kb on + strandat 4097.840 kb on - strandat 4097.994 kb on + strand, within BWI76_RS19600at 4098.227 kb on - strand, within BWI76_RS19600at 4098.240 kb on - strand, within BWI76_RS19600at 4098.264 kb on - strand, within BWI76_RS19600at 4098.353 kb on + strandat 4098.452 kb on + strand, within BWI76_RS19605at 4098.544 kb on - strand, within BWI76_RS19605at 4098.746 kb on + strand, within BWI76_RS19605at 4098.841 kb on - strand, within BWI76_RS19605at 4098.854 kb on + strand, within BWI76_RS19605at 4098.875 kb on + strand, within BWI76_RS19605at 4099.183 kb on + strandat 4099.257 kb on + strand, within BWI76_RS19610at 4099.486 kb on + strand, within BWI76_RS19610at 4099.495 kb on - strand, within BWI76_RS19610at 4099.535 kb on + strand, within BWI76_RS19610at 4099.536 kb on + strand, within BWI76_RS19610at 4099.593 kb on - strand, within BWI76_RS19610at 4099.674 kb on + strand, within BWI76_RS19610

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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4,097,414 - BWI76_RS19595 0.55 +0.2
4,097,477 - BWI76_RS19595 0.62 -1.3
4,097,555 + BWI76_RS19595 0.71 -0.3
4,097,672 + BWI76_RS19595 0.84 -0.3
4,097,672 + BWI76_RS19595 0.84 +0.5
4,097,672 + BWI76_RS19595 0.84 +0.6
4,097,672 + BWI76_RS19595 0.84 -1.2
4,097,680 - BWI76_RS19595 0.84 -0.8
4,097,690 - BWI76_RS19595 0.86 +0.3
4,097,726 + BWI76_RS19595 0.89 +0.4
4,097,770 + -0.4
4,097,840 - -1.2
4,097,994 + BWI76_RS19600 0.13 -0.1
4,098,227 - BWI76_RS19600 0.71 +0.2
4,098,240 - BWI76_RS19600 0.74 +0.4
4,098,264 - BWI76_RS19600 0.80 +0.3
4,098,353 + +1.6
4,098,452 + BWI76_RS19605 0.16 +0.2
4,098,544 - BWI76_RS19605 0.29 +0.4
4,098,746 + BWI76_RS19605 0.58 +0.4
4,098,841 - BWI76_RS19605 0.72 +1.4
4,098,854 + BWI76_RS19605 0.74 +0.8
4,098,875 + BWI76_RS19605 0.77 +0.4
4,099,183 + +0.2
4,099,257 + BWI76_RS19610 0.11 +0.5
4,099,486 + BWI76_RS19610 0.37 +0.7
4,099,495 - BWI76_RS19610 0.38 -0.7
4,099,535 + BWI76_RS19610 0.42 -0.3
4,099,536 + BWI76_RS19610 0.42 +0.3
4,099,593 - BWI76_RS19610 0.49 -0.5
4,099,674 + BWI76_RS19610 0.58 +0.4

Or see this region's nucleotide sequence