Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18770

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18765 and BWI76_RS18770 are separated by 102 nucleotidesBWI76_RS18770 and BWI76_RS18775 are separated by 127 nucleotides BWI76_RS18765: BWI76_RS18765 - FUSC family protein, at 3,888,583 to 3,889,641 _RS18765 BWI76_RS18770: BWI76_RS18770 - DNA gyrase inhibitor, at 3,889,744 to 3,890,217 _RS18770 BWI76_RS18775: BWI76_RS18775 - hypothetical protein, at 3,890,345 to 3,891,781 _RS18775 Position (kb) 3889 3890 3891Strain fitness (log2 ratio) -1 0 1at 3888.776 kb on + strand, within BWI76_RS18765at 3888.848 kb on - strand, within BWI76_RS18765at 3888.914 kb on + strand, within BWI76_RS18765at 3889.086 kb on + strand, within BWI76_RS18765at 3889.189 kb on + strand, within BWI76_RS18765at 3889.350 kb on - strand, within BWI76_RS18765at 3889.536 kb on + strandat 3889.544 kb on - strandat 3890.075 kb on + strand, within BWI76_RS18770at 3890.198 kb on + strandat 3890.278 kb on + strandat 3890.378 kb on + strandat 3890.544 kb on + strand, within BWI76_RS18775at 3890.644 kb on - strand, within BWI76_RS18775

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,888,776 + BWI76_RS18765 0.18 +0.2
3,888,848 - BWI76_RS18765 0.25 +0.5
3,888,914 + BWI76_RS18765 0.31 -0.2
3,889,086 + BWI76_RS18765 0.47 +0.1
3,889,189 + BWI76_RS18765 0.57 +0.8
3,889,350 - BWI76_RS18765 0.72 +0.3
3,889,536 + +0.2
3,889,544 - -1.0
3,890,075 + BWI76_RS18770 0.70 +0.8
3,890,198 + -0.1
3,890,278 + -0.4
3,890,378 + -0.5
3,890,544 + BWI76_RS18775 0.14 -0.6
3,890,644 - BWI76_RS18775 0.21 +1.7

Or see this region's nucleotide sequence