Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18225

Experiment: 2-Deoxyadenosine 4 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBWI76_RS18220 and BWI76_RS18225 are separated by 362 nucleotidesBWI76_RS18225 and BWI76_RS18230 are separated by 28 nucleotides BWI76_RS18220: BWI76_RS18220 - MFS transporter, at 3,785,287 to 3,786,870 _RS18220 BWI76_RS18225: BWI76_RS18225 - universal stress protein C, at 3,787,233 to 3,787,661 _RS18225 BWI76_RS18230: BWI76_RS18230 - trehalose-6-phosphate synthase, at 3,787,690 to 3,789,114 _RS18230 Position (kb) 3787 3788Strain fitness (log2 ratio) -1 0 1at 3786.241 kb on - strand, within BWI76_RS18220at 3786.311 kb on - strand, within BWI76_RS18220at 3786.311 kb on - strand, within BWI76_RS18220at 3786.311 kb on - strand, within BWI76_RS18220at 3786.403 kb on + strand, within BWI76_RS18220at 3787.542 kb on + strand, within BWI76_RS18225at 3787.542 kb on + strand, within BWI76_RS18225at 3787.567 kb on + strand, within BWI76_RS18225at 3787.672 kb on + strandat 3788.197 kb on + strand, within BWI76_RS18230at 3788.323 kb on - strand, within BWI76_RS18230at 3788.400 kb on + strand, within BWI76_RS18230at 3788.412 kb on + strand, within BWI76_RS18230

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
remove
3,786,241 - BWI76_RS18220 0.60 +0.3
3,786,311 - BWI76_RS18220 0.65 +0.2
3,786,311 - BWI76_RS18220 0.65 -0.3
3,786,311 - BWI76_RS18220 0.65 -0.1
3,786,403 + BWI76_RS18220 0.70 -0.3
3,787,542 + BWI76_RS18225 0.72 +0.5
3,787,542 + BWI76_RS18225 0.72 +0.6
3,787,567 + BWI76_RS18225 0.78 +0.5
3,787,672 + +0.0
3,788,197 + BWI76_RS18230 0.36 +0.3
3,788,323 - BWI76_RS18230 0.44 -0.6
3,788,400 + BWI76_RS18230 0.50 +0.2
3,788,412 + BWI76_RS18230 0.51 +0.3

Or see this region's nucleotide sequence