Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17740

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17735 and BWI76_RS17740 are separated by 321 nucleotidesBWI76_RS17740 and BWI76_RS17745 are separated by 59 nucleotides BWI76_RS17735: BWI76_RS17735 - D-amino acid dehydrogenase small subunit, at 3,687,568 to 3,688,866 _RS17735 BWI76_RS17740: BWI76_RS17740 - SpoVR family protein, at 3,689,188 to 3,690,720 _RS17740 BWI76_RS17745: BWI76_RS17745 - fatty acid metabolism transcriptional regulator FadR, at 3,690,780 to 3,691,499 _RS17745 Position (kb) 3689 3690 3691Strain fitness (log2 ratio) -1 0 1at 3688.330 kb on - strand, within BWI76_RS17735at 3688.522 kb on + strand, within BWI76_RS17735at 3688.677 kb on + strand, within BWI76_RS17735at 3688.750 kb on + strandat 3688.800 kb on - strandat 3688.951 kb on - strandat 3688.978 kb on + strandat 3688.991 kb on - strandat 3689.053 kb on - strandat 3689.127 kb on + strandat 3689.232 kb on + strandat 3689.260 kb on + strandat 3689.267 kb on - strandat 3689.274 kb on + strandat 3689.492 kb on - strand, within BWI76_RS17740at 3689.556 kb on - strand, within BWI76_RS17740at 3689.689 kb on - strand, within BWI76_RS17740at 3689.753 kb on - strand, within BWI76_RS17740at 3689.753 kb on - strand, within BWI76_RS17740at 3689.823 kb on + strand, within BWI76_RS17740at 3690.054 kb on + strand, within BWI76_RS17740at 3690.094 kb on - strand, within BWI76_RS17740at 3690.132 kb on + strand, within BWI76_RS17740at 3690.290 kb on + strand, within BWI76_RS17740at 3690.328 kb on + strand, within BWI76_RS17740at 3690.383 kb on + strand, within BWI76_RS17740at 3690.383 kb on + strand, within BWI76_RS17740at 3690.537 kb on - strand, within BWI76_RS17740at 3690.583 kb on - strandat 3690.588 kb on + strandat 3691.536 kb on + strandat 3691.544 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,688,330 - BWI76_RS17735 0.59 -0.6
3,688,522 + BWI76_RS17735 0.73 +1.1
3,688,677 + BWI76_RS17735 0.85 +0.0
3,688,750 + -0.0
3,688,800 - +0.2
3,688,951 - -0.5
3,688,978 + -0.3
3,688,991 - -0.5
3,689,053 - -0.3
3,689,127 + -0.5
3,689,232 + +0.8
3,689,260 + -1.1
3,689,267 - +0.5
3,689,274 + +1.5
3,689,492 - BWI76_RS17740 0.20 +0.4
3,689,556 - BWI76_RS17740 0.24 +0.1
3,689,689 - BWI76_RS17740 0.33 +0.6
3,689,753 - BWI76_RS17740 0.37 +0.1
3,689,753 - BWI76_RS17740 0.37 +1.3
3,689,823 + BWI76_RS17740 0.41 +1.2
3,690,054 + BWI76_RS17740 0.56 +0.6
3,690,094 - BWI76_RS17740 0.59 +0.4
3,690,132 + BWI76_RS17740 0.62 +0.5
3,690,290 + BWI76_RS17740 0.72 +0.1
3,690,328 + BWI76_RS17740 0.74 +1.6
3,690,383 + BWI76_RS17740 0.78 -0.0
3,690,383 + BWI76_RS17740 0.78 +0.6
3,690,537 - BWI76_RS17740 0.88 -0.1
3,690,583 - +0.4
3,690,588 + +0.5
3,691,536 + -0.3
3,691,544 - -0.2

Or see this region's nucleotide sequence