Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS16235 and BWI76_RS16240 are separated by 990 nucleotides BWI76_RS16240 and BWI76_RS16245 overlap by 93 nucleotides BWI76_RS16245 and BWI76_RS16250 are separated by 213 nucleotides
BWI76_RS16235: BWI76_RS16235 - membrane protein, at 3,367,609 to 3,367,944
_RS16235
BWI76_RS16240: BWI76_RS16240 - anti-adapter protein IraM, at 3,368,935 to 3,369,282
_RS16240
BWI76_RS16245: BWI76_RS16245 - hypothetical protein, at 3,369,190 to 3,369,407
_RS16245
BWI76_RS16250: BWI76_RS16250 - DNA-binding response regulator, at 3,369,621 to 3,370,337
_RS16250
Position (kb)
3368
3369
3370 Strain fitness (log2 ratio)
-1
0
1
2 at 3368.773 kb on - strand at 3368.900 kb on - strand at 3369.038 kb on - strand, within BWI76_RS16240 at 3369.064 kb on + strand, within BWI76_RS16240 at 3369.155 kb on + strand, within BWI76_RS16240 at 3369.169 kb on - strand, within BWI76_RS16240 at 3369.219 kb on + strand at 3369.249 kb on + strand at 3369.257 kb on - strand at 3369.270 kb on - strand at 3369.270 kb on - strand at 3369.272 kb on + strand at 3369.277 kb on + strand at 3369.277 kb on + strand at 3369.277 kb on + strand at 3369.284 kb on + strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.285 kb on - strand, within BWI76_RS16245 at 3369.302 kb on - strand, within BWI76_RS16245 at 3369.314 kb on - strand, within BWI76_RS16245 at 3369.314 kb on - strand, within BWI76_RS16245 at 3369.321 kb on + strand, within BWI76_RS16245 at 3369.329 kb on - strand, within BWI76_RS16245 at 3369.329 kb on - strand, within BWI76_RS16245 at 3369.413 kb on + strand at 3369.425 kb on + strand at 3369.425 kb on + strand at 3369.425 kb on + strand at 3369.430 kb on + strand at 3369.433 kb on - strand at 3369.438 kb on - strand at 3369.438 kb on - strand at 3369.438 kb on - strand at 3369.438 kb on - strand at 3369.530 kb on - strand at 3369.556 kb on - strand at 3369.736 kb on + strand, within BWI76_RS16250 at 3369.994 kb on + strand, within BWI76_RS16250 at 3369.994 kb on - strand, within BWI76_RS16250 at 3370.203 kb on + strand, within BWI76_RS16250 at 3370.203 kb on + strand, within BWI76_RS16250
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 3,368,773 - -1.2 3,368,900 - +0.6 3,369,038 - BWI76_RS16240 0.30 +1.3 3,369,064 + BWI76_RS16240 0.37 +0.2 3,369,155 + BWI76_RS16240 0.63 +0.7 3,369,169 - BWI76_RS16240 0.67 +0.8 3,369,219 + +0.9 3,369,249 + -0.2 3,369,257 - -0.1 3,369,270 - -0.1 3,369,270 - -0.4 3,369,272 + +2.5 3,369,277 + +0.2 3,369,277 + +1.4 3,369,277 + +0.3 3,369,284 + BWI76_RS16245 0.43 -0.3 3,369,285 - BWI76_RS16245 0.44 -0.2 3,369,285 - BWI76_RS16245 0.44 -1.3 3,369,285 - BWI76_RS16245 0.44 +0.2 3,369,285 - BWI76_RS16245 0.44 -0.3 3,369,302 - BWI76_RS16245 0.51 -0.9 3,369,314 - BWI76_RS16245 0.57 +0.1 3,369,314 - BWI76_RS16245 0.57 +0.3 3,369,321 + BWI76_RS16245 0.60 +1.2 3,369,329 - BWI76_RS16245 0.64 +1.8 3,369,329 - BWI76_RS16245 0.64 -0.0 3,369,413 + +0.7 3,369,425 + -0.7 3,369,425 + +0.7 3,369,425 + -0.0 3,369,430 + -0.0 3,369,433 - -0.2 3,369,438 - +0.0 3,369,438 - +0.0 3,369,438 - -1.1 3,369,438 - +0.6 3,369,530 - +1.4 3,369,556 - +1.1 3,369,736 + BWI76_RS16250 0.16 -0.6 3,369,994 + BWI76_RS16250 0.52 +0.6 3,369,994 - BWI76_RS16250 0.52 +0.4 3,370,203 + BWI76_RS16250 0.81 -0.1 3,370,203 + BWI76_RS16250 0.81 +0.1
Or see this region's nucleotide sequence