Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15835 and BWI76_RS15840 are separated by 151 nucleotides BWI76_RS15840 and BWI76_RS15845 overlap by 17 nucleotides BWI76_RS15845 and BWI76_RS15850 overlap by 4 nucleotides BWI76_RS15850 and BWI76_RS15855 overlap by 4 nucleotides BWI76_RS15855 and BWI76_RS15860 overlap by 4 nucleotides
BWI76_RS15835: BWI76_RS15835 - hypothetical protein, at 3,291,674 to 3,291,871
_RS15835
BWI76_RS15840: BWI76_RS15840 - prophage protein, at 3,292,023 to 3,292,805
_RS15840
BWI76_RS15845: BWI76_RS15845 - hypothetical protein, at 3,292,789 to 3,293,079
_RS15845
BWI76_RS15850: BWI76_RS15850 - DUF1317 domain-containing protein, at 3,293,076 to 3,293,234
_RS15850
BWI76_RS15855: BWI76_RS15855 - hypothetical protein, at 3,293,231 to 3,293,458
_RS15855
BWI76_RS15860: BWI76_RS15860 - adenine-specific DNA methyltransferase, at 3,293,455 to 3,294,114
_RS15860
Position (kb) 3292
3293
3294 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 3291.801 kb on + strand, within BWI76_RS15835 at 3291.830 kb on + strand, within BWI76_RS15835 at 3292.119 kb on + strand, within BWI76_RS15840 at 3292.119 kb on + strand, within BWI76_RS15840 at 3292.126 kb on - strand, within BWI76_RS15840 at 3292.127 kb on - strand, within BWI76_RS15840 at 3292.295 kb on + strand, within BWI76_RS15840 at 3292.349 kb on + strand, within BWI76_RS15840 at 3292.349 kb on - strand, within BWI76_RS15840 at 3292.520 kb on + strand, within BWI76_RS15840 at 3292.520 kb on + strand, within BWI76_RS15840 at 3292.520 kb on + strand, within BWI76_RS15840 at 3292.528 kb on - strand, within BWI76_RS15840 at 3292.528 kb on - strand, within BWI76_RS15840 at 3292.674 kb on - strand, within BWI76_RS15840 at 3292.787 kb on - strand at 3293.003 kb on - strand, within BWI76_RS15845 at 3293.200 kb on - strand, within BWI76_RS15850 at 3293.215 kb on + strand, within BWI76_RS15850 at 3293.538 kb on + strand, within BWI76_RS15860 at 3293.610 kb on + strand, within BWI76_RS15860 at 3293.677 kb on - strand, within BWI76_RS15860 at 3293.694 kb on - strand, within BWI76_RS15860 at 3293.736 kb on + strand, within BWI76_RS15860 at 3293.814 kb on - strand, within BWI76_RS15860 at 3293.968 kb on - strand, within BWI76_RS15860
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 3,291,801 + BWI76_RS15835 0.64 -5.5 3,291,830 + BWI76_RS15835 0.79 -6.1 3,292,119 + BWI76_RS15840 0.12 -4.8 3,292,119 + BWI76_RS15840 0.12 -3.5 3,292,126 - BWI76_RS15840 0.13 +0.4 3,292,127 - BWI76_RS15840 0.13 +0.4 3,292,295 + BWI76_RS15840 0.35 -4.4 3,292,349 + BWI76_RS15840 0.42 -2.1 3,292,349 - BWI76_RS15840 0.42 -0.2 3,292,520 + BWI76_RS15840 0.63 -3.2 3,292,520 + BWI76_RS15840 0.63 -5.3 3,292,520 + BWI76_RS15840 0.63 -1.3 3,292,528 - BWI76_RS15840 0.64 +0.6 3,292,528 - BWI76_RS15840 0.64 -0.3 3,292,674 - BWI76_RS15840 0.83 +0.3 3,292,787 - -2.3 3,293,003 - BWI76_RS15845 0.74 +0.9 3,293,200 - BWI76_RS15850 0.78 -0.1 3,293,215 + BWI76_RS15850 0.87 -1.7 3,293,538 + BWI76_RS15860 0.13 +0.5 3,293,610 + BWI76_RS15860 0.23 +0.1 3,293,677 - BWI76_RS15860 0.34 -0.0 3,293,694 - BWI76_RS15860 0.36 -0.6 3,293,736 + BWI76_RS15860 0.43 -0.2 3,293,814 - BWI76_RS15860 0.54 -0.9 3,293,968 - BWI76_RS15860 0.78 -0.4
Or see this region's nucleotide sequence