Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14945

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14940 and BWI76_RS14945 are separated by 154 nucleotidesBWI76_RS14945 and BWI76_RS14950 are separated by 4 nucleotidesBWI76_RS14950 and BWI76_RS14955 are separated by 3 nucleotides BWI76_RS14940: BWI76_RS14940 - hypothetical protein, at 3,130,955 to 3,131,803 _RS14940 BWI76_RS14945: BWI76_RS14945 - PTS system, cellobiose-specific IIC component, at 3,131,958 to 3,133,277 _RS14945 BWI76_RS14950: BWI76_RS14950 - glycosylasparaginase, at 3,133,282 to 3,134,235 _RS14950 BWI76_RS14955: BWI76_RS14955 - peptidase M17 leucyl aminopeptidase domain-containing protein, at 3,134,239 to 3,135,594 _RS14955 Position (kb) 3131 3132 3133 3134Strain fitness (log2 ratio) -1 0 1at 3131.271 kb on + strand, within BWI76_RS14940at 3131.348 kb on - strand, within BWI76_RS14940at 3131.580 kb on - strand, within BWI76_RS14940at 3131.586 kb on + strand, within BWI76_RS14940at 3131.879 kb on + strandat 3132.075 kb on + strandat 3132.129 kb on - strand, within BWI76_RS14945at 3132.620 kb on + strand, within BWI76_RS14945at 3132.657 kb on + strand, within BWI76_RS14945at 3133.014 kb on + strand, within BWI76_RS14945at 3133.024 kb on - strand, within BWI76_RS14945at 3133.074 kb on - strand, within BWI76_RS14945at 3133.131 kb on + strand, within BWI76_RS14945at 3133.370 kb on + strandat 3133.421 kb on - strandat 3133.637 kb on + strand, within BWI76_RS14950at 3133.851 kb on - strand, within BWI76_RS14950at 3133.851 kb on - strand, within BWI76_RS14950at 3134.204 kb on - strandat 3134.232 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,131,271 + BWI76_RS14940 0.37 +0.4
3,131,348 - BWI76_RS14940 0.46 +0.2
3,131,580 - BWI76_RS14940 0.74 +0.3
3,131,586 + BWI76_RS14940 0.74 -1.2
3,131,879 + -0.2
3,132,075 + -0.1
3,132,129 - BWI76_RS14945 0.13 +0.3
3,132,620 + BWI76_RS14945 0.50 -0.3
3,132,657 + BWI76_RS14945 0.53 +0.6
3,133,014 + BWI76_RS14945 0.80 +0.9
3,133,024 - BWI76_RS14945 0.81 +0.6
3,133,074 - BWI76_RS14945 0.85 +0.4
3,133,131 + BWI76_RS14945 0.89 +0.9
3,133,370 + +0.1
3,133,421 - +0.7
3,133,637 + BWI76_RS14950 0.37 +0.8
3,133,851 - BWI76_RS14950 0.60 -0.2
3,133,851 - BWI76_RS14950 0.60 +0.3
3,134,204 - +0.6
3,134,232 - -0.0

Or see this region's nucleotide sequence