Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14665

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14665 and BWI76_RS14670 are separated by 10 nucleotidesBWI76_RS14670 and BWI76_RS14675 overlap by 86 nucleotides BWI76_RS14665: BWI76_RS14665 - minor fimbrial subunit YfcQ, at 3,080,566 to 3,081,081 _RS14665 BWI76_RS14670: BWI76_RS14670 - hypothetical protein, at 3,081,092 to 3,081,697 _RS14670 BWI76_RS14675: BWI76_RS14675 - fimbrial chaperone YfcS, at 3,081,612 to 3,082,364 _RS14675 Position (kb) 3080 3081 3082Strain fitness (log2 ratio) -2 -1 0 1 2at 3079.598 kb on + strandat 3079.601 kb on - strandat 3079.601 kb on - strandat 3079.603 kb on + strandat 3079.603 kb on + strandat 3079.603 kb on + strandat 3079.603 kb on + strandat 3079.606 kb on - strandat 3079.606 kb on - strandat 3079.606 kb on - strandat 3079.606 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.611 kb on - strandat 3079.619 kb on + strandat 3079.619 kb on + strandat 3079.620 kb on + strandat 3079.620 kb on + strandat 3079.625 kb on + strandat 3079.625 kb on + strandat 3079.626 kb on - strandat 3079.627 kb on - strandat 3079.627 kb on - strandat 3079.627 kb on - strandat 3079.633 kb on - strandat 3079.633 kb on - strandat 3079.633 kb on - strandat 3079.633 kb on - strandat 3079.645 kb on - strandat 3079.689 kb on + strandat 3079.692 kb on + strandat 3079.692 kb on + strandat 3079.696 kb on + strandat 3079.696 kb on + strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.704 kb on - strandat 3079.727 kb on + strandat 3079.727 kb on + strandat 3079.727 kb on + strandat 3079.727 kb on + strandat 3079.730 kb on - strandat 3079.735 kb on - strandat 3079.749 kb on + strandat 3079.757 kb on + strandat 3079.761 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.766 kb on + strandat 3079.773 kb on + strandat 3079.773 kb on + strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.774 kb on - strandat 3079.784 kb on + strandat 3079.784 kb on + strandat 3079.792 kb on - strandat 3079.792 kb on - strandat 3079.792 kb on - strandat 3079.800 kb on + strandat 3079.803 kb on - strandat 3079.803 kb on - strandat 3079.805 kb on + strandat 3079.834 kb on + strandat 3079.837 kb on - strandat 3079.838 kb on - strandat 3079.889 kb on + strandat 3079.889 kb on + strandat 3079.897 kb on - strandat 3080.046 kb on - strandat 3080.046 kb on - strandat 3080.063 kb on - strandat 3080.110 kb on + strandat 3080.115 kb on + strandat 3080.123 kb on - strandat 3080.166 kb on - strandat 3080.290 kb on - strandat 3080.454 kb on - strandat 3080.462 kb on - strandat 3080.482 kb on - strandat 3080.482 kb on - strandat 3080.649 kb on - strand, within BWI76_RS14665at 3080.805 kb on + strand, within BWI76_RS14665at 3080.899 kb on - strand, within BWI76_RS14665at 3081.057 kb on - strandat 3081.158 kb on - strand, within BWI76_RS14670at 3081.205 kb on + strand, within BWI76_RS14670at 3081.736 kb on - strand, within BWI76_RS14675at 3081.752 kb on - strand, within BWI76_RS14675at 3081.752 kb on - strand, within BWI76_RS14675at 3081.865 kb on + strand, within BWI76_RS14675at 3081.935 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,079,598 + -0.0
3,079,601 - +0.5
3,079,601 - -0.3
3,079,603 + -0.4
3,079,603 + +1.0
3,079,603 + -0.4
3,079,603 + +1.0
3,079,606 - +0.4
3,079,606 - +0.4
3,079,606 - +0.2
3,079,606 - +0.2
3,079,611 - +0.3
3,079,611 - +1.8
3,079,611 - -0.1
3,079,611 - +0.4
3,079,611 - -0.2
3,079,611 - -0.6
3,079,611 - +1.5
3,079,619 + +0.1
3,079,619 + +0.9
3,079,620 + -0.5
3,079,620 + -0.5
3,079,625 + +1.5
3,079,625 + -0.0
3,079,626 - -0.8
3,079,627 - +1.1
3,079,627 - +1.4
3,079,627 - +0.2
3,079,633 - -0.0
3,079,633 - -0.3
3,079,633 - -0.3
3,079,633 - -0.6
3,079,645 - +0.5
3,079,689 + +1.6
3,079,692 + +0.1
3,079,692 + +0.6
3,079,696 + +0.3
3,079,696 + -0.6
3,079,704 - -0.2
3,079,704 - -0.9
3,079,704 - +0.3
3,079,704 - -0.1
3,079,704 - -2.6
3,079,727 + -0.5
3,079,727 + -0.6
3,079,727 + -1.1
3,079,727 + +0.4
3,079,730 - +0.5
3,079,735 - -0.0
3,079,749 + +0.0
3,079,757 + -0.8
3,079,761 + -1.4
3,079,766 + -0.8
3,079,766 + -0.5
3,079,766 + -0.0
3,079,766 + -0.0
3,079,766 + +0.4
3,079,766 + -1.9
3,079,766 + -0.9
3,079,766 + +0.3
3,079,773 + -0.4
3,079,773 + -0.2
3,079,774 - +0.6
3,079,774 - +0.9
3,079,774 - +0.8
3,079,774 - +1.6
3,079,774 - +0.2
3,079,784 + -0.7
3,079,784 + -0.2
3,079,792 - -0.3
3,079,792 - +0.4
3,079,792 - -1.4
3,079,800 + +0.2
3,079,803 - +0.3
3,079,803 - +1.7
3,079,805 + +0.6
3,079,834 + -0.3
3,079,837 - -0.5
3,079,838 - +0.6
3,079,889 + -0.1
3,079,889 + -0.7
3,079,897 - -1.3
3,080,046 - +1.3
3,080,046 - +0.4
3,080,063 - -0.5
3,080,110 + -0.0
3,080,115 + -1.1
3,080,123 - +1.1
3,080,166 - -0.9
3,080,290 - +0.1
3,080,454 - -0.9
3,080,462 - -0.6
3,080,482 - +1.1
3,080,482 - +0.1
3,080,649 - BWI76_RS14665 0.16 +0.1
3,080,805 + BWI76_RS14665 0.46 +1.1
3,080,899 - BWI76_RS14665 0.65 +0.3
3,081,057 - +0.4
3,081,158 - BWI76_RS14670 0.11 -0.4
3,081,205 + BWI76_RS14670 0.19 +0.1
3,081,736 - BWI76_RS14675 0.16 -0.0
3,081,752 - BWI76_RS14675 0.19 +0.2
3,081,752 - BWI76_RS14675 0.19 -0.3
3,081,865 + BWI76_RS14675 0.34 +0.6
3,081,935 + -0.9

Or see this region's nucleotide sequence