Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14505

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14500 and BWI76_RS14505 are separated by 69 nucleotidesBWI76_RS14505 and BWI76_RS14510 are separated by 27 nucleotides BWI76_RS14500: BWI76_RS14500 - MFS transporter, at 3,027,047 to 3,028,438 _RS14500 BWI76_RS14505: BWI76_RS14505 - salicylate synthase Irp9, at 3,028,508 to 3,029,818 _RS14505 BWI76_RS14510: BWI76_RS14510 - MFS transporter, at 3,029,846 to 3,031,126 _RS14510 Position (kb) 3028 3029 3030Strain fitness (log2 ratio) -1 0 1 2at 3027.675 kb on - strand, within BWI76_RS14500at 3027.695 kb on - strand, within BWI76_RS14500at 3027.707 kb on + strand, within BWI76_RS14500at 3027.798 kb on - strand, within BWI76_RS14500at 3027.852 kb on + strand, within BWI76_RS14500at 3027.874 kb on + strand, within BWI76_RS14500at 3028.049 kb on - strand, within BWI76_RS14500at 3028.203 kb on - strand, within BWI76_RS14500at 3028.251 kb on + strand, within BWI76_RS14500at 3028.342 kb on + strandat 3028.426 kb on - strandat 3028.527 kb on - strandat 3028.527 kb on - strandat 3028.565 kb on - strandat 3028.983 kb on - strand, within BWI76_RS14505at 3029.349 kb on - strand, within BWI76_RS14505at 3029.734 kb on - strandat 3030.343 kb on - strand, within BWI76_RS14510at 3030.519 kb on + strand, within BWI76_RS14510at 3030.530 kb on + strand, within BWI76_RS14510at 3030.653 kb on + strand, within BWI76_RS14510at 3030.661 kb on - strand, within BWI76_RS14510

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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3,027,675 - BWI76_RS14500 0.45 -0.5
3,027,695 - BWI76_RS14500 0.47 +0.2
3,027,707 + BWI76_RS14500 0.47 +0.8
3,027,798 - BWI76_RS14500 0.54 +0.7
3,027,852 + BWI76_RS14500 0.58 +0.7
3,027,874 + BWI76_RS14500 0.59 +1.4
3,028,049 - BWI76_RS14500 0.72 +0.4
3,028,203 - BWI76_RS14500 0.83 -0.2
3,028,251 + BWI76_RS14500 0.86 -0.3
3,028,342 + +0.2
3,028,426 - +0.5
3,028,527 - +0.4
3,028,527 - -0.2
3,028,565 - -0.2
3,028,983 - BWI76_RS14505 0.36 +1.8
3,029,349 - BWI76_RS14505 0.64 -0.1
3,029,734 - +0.0
3,030,343 - BWI76_RS14510 0.39 +0.8
3,030,519 + BWI76_RS14510 0.53 -1.3
3,030,530 + BWI76_RS14510 0.53 -0.7
3,030,653 + BWI76_RS14510 0.63 +0.3
3,030,661 - BWI76_RS14510 0.64 -0.2

Or see this region's nucleotide sequence