Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS13560

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS13550 and BWI76_RS13555 overlap by 17 nucleotidesBWI76_RS13555 and BWI76_RS13560 overlap by 4 nucleotidesBWI76_RS13560 and BWI76_RS13565 are separated by 65 nucleotides BWI76_RS13550: BWI76_RS13550 - polar amino acid ABC transporter inner membrane subunit, at 2,825,000 to 2,825,926 _RS13550 BWI76_RS13555: BWI76_RS13555 - ABC transporter, at 2,825,910 to 2,826,689 _RS13555 BWI76_RS13560: BWI76_RS13560 - amino acid ABC transporter substrate-binding subunit, at 2,826,686 to 2,827,579 _RS13560 BWI76_RS13565: BWI76_RS13565 - MFS transporter, at 2,827,645 to 2,828,955 _RS13565 Position (kb) 2826 2827 2828Strain fitness (log2 ratio) -2 -1 0 1 2at 2825.689 kb on + strand, within BWI76_RS13550at 2825.697 kb on - strand, within BWI76_RS13550at 2825.716 kb on - strand, within BWI76_RS13550at 2825.791 kb on + strand, within BWI76_RS13550at 2825.902 kb on - strandat 2825.906 kb on + strandat 2826.466 kb on - strand, within BWI76_RS13555at 2826.987 kb on + strand, within BWI76_RS13560at 2827.992 kb on - strand, within BWI76_RS13565at 2827.992 kb on - strand, within BWI76_RS13565at 2828.021 kb on - strand, within BWI76_RS13565at 2828.143 kb on + strand, within BWI76_RS13565at 2828.144 kb on + strand, within BWI76_RS13565at 2828.144 kb on + strand, within BWI76_RS13565at 2828.144 kb on + strand, within BWI76_RS13565at 2828.152 kb on - strand, within BWI76_RS13565at 2828.152 kb on - strand, within BWI76_RS13565at 2828.154 kb on + strand, within BWI76_RS13565at 2828.154 kb on + strand, within BWI76_RS13565at 2828.154 kb on + strand, within BWI76_RS13565at 2828.154 kb on + strand, within BWI76_RS13565at 2828.154 kb on + strand, within BWI76_RS13565at 2828.154 kb on + strand, within BWI76_RS13565at 2828.162 kb on - strand, within BWI76_RS13565at 2828.162 kb on - strand, within BWI76_RS13565at 2828.162 kb on - strand, within BWI76_RS13565at 2828.162 kb on - strand, within BWI76_RS13565at 2828.162 kb on - strandat 2828.162 kb on - strand, within BWI76_RS13565at 2828.162 kb on - strand, within BWI76_RS13565at 2828.165 kb on + strand, within BWI76_RS13565at 2828.179 kb on - strand, within BWI76_RS13565at 2828.184 kb on - strand, within BWI76_RS13565at 2828.209 kb on + strand, within BWI76_RS13565at 2828.209 kb on + strand, within BWI76_RS13565at 2828.212 kb on - strand, within BWI76_RS13565at 2828.212 kb on - strand, within BWI76_RS13565at 2828.217 kb on - strand, within BWI76_RS13565at 2828.228 kb on - strand, within BWI76_RS13565at 2828.228 kb on - strand, within BWI76_RS13565at 2828.263 kb on - strand, within BWI76_RS13565at 2828.263 kb on - strand, within BWI76_RS13565at 2828.263 kb on - strand, within BWI76_RS13565at 2828.263 kb on - strand, within BWI76_RS13565at 2828.272 kb on + strand, within BWI76_RS13565at 2828.281 kb on - strand, within BWI76_RS13565at 2828.307 kb on - strand, within BWI76_RS13565at 2828.314 kb on + strand, within BWI76_RS13565at 2828.372 kb on - strand, within BWI76_RS13565at 2828.383 kb on - strand, within BWI76_RS13565at 2828.384 kb on - strand, within BWI76_RS13565at 2828.406 kb on + strand, within BWI76_RS13565at 2828.414 kb on - strand, within BWI76_RS13565at 2828.420 kb on - strand, within BWI76_RS13565at 2828.449 kb on + strand, within BWI76_RS13565at 2828.498 kb on + strand, within BWI76_RS13565at 2828.498 kb on + strand, within BWI76_RS13565at 2828.498 kb on + strand, within BWI76_RS13565at 2828.498 kb on + strand, within BWI76_RS13565at 2828.498 kb on + strandat 2828.498 kb on + strand, within BWI76_RS13565at 2828.500 kb on + strand, within BWI76_RS13565at 2828.506 kb on - strand, within BWI76_RS13565at 2828.506 kb on - strand, within BWI76_RS13565at 2828.508 kb on - strand, within BWI76_RS13565at 2828.513 kb on + strand, within BWI76_RS13565at 2828.513 kb on + strand, within BWI76_RS13565at 2828.513 kb on + strand, within BWI76_RS13565at 2828.513 kb on + strand, within BWI76_RS13565at 2828.513 kb on + strand, within BWI76_RS13565at 2828.515 kb on + strand, within BWI76_RS13565at 2828.521 kb on - strand, within BWI76_RS13565at 2828.521 kb on - strand, within BWI76_RS13565at 2828.523 kb on - strand, within BWI76_RS13565at 2828.527 kb on + strand, within BWI76_RS13565at 2828.528 kb on - strand, within BWI76_RS13565at 2828.571 kb on + strand, within BWI76_RS13565

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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2,825,689 + BWI76_RS13550 0.74 +1.6
2,825,697 - BWI76_RS13550 0.75 -0.3
2,825,716 - BWI76_RS13550 0.77 -0.2
2,825,791 + BWI76_RS13550 0.85 +0.2
2,825,902 - +0.2
2,825,906 + +0.8
2,826,466 - BWI76_RS13555 0.71 -0.2
2,826,987 + BWI76_RS13560 0.34 +0.5
2,827,992 - BWI76_RS13565 0.26 +0.0
2,827,992 - BWI76_RS13565 0.26 -0.0
2,828,021 - BWI76_RS13565 0.29 -0.1
2,828,143 + BWI76_RS13565 0.38 -2.7
2,828,144 + BWI76_RS13565 0.38 +0.5
2,828,144 + BWI76_RS13565 0.38 -0.1
2,828,144 + BWI76_RS13565 0.38 +0.8
2,828,152 - BWI76_RS13565 0.39 +0.5
2,828,152 - BWI76_RS13565 0.39 -0.4
2,828,154 + BWI76_RS13565 0.39 -0.6
2,828,154 + BWI76_RS13565 0.39 +0.9
2,828,154 + BWI76_RS13565 0.39 +0.8
2,828,154 + BWI76_RS13565 0.39 +1.2
2,828,154 + BWI76_RS13565 0.39 -0.7
2,828,154 + BWI76_RS13565 0.39 +0.3
2,828,162 - BWI76_RS13565 0.39 +0.1
2,828,162 - BWI76_RS13565 0.39 +0.1
2,828,162 - BWI76_RS13565 0.39 -0.2
2,828,162 - BWI76_RS13565 0.39 -1.7
2,828,162 - +1.6
2,828,162 - BWI76_RS13565 0.39 -0.2
2,828,162 - BWI76_RS13565 0.39 -0.1
2,828,165 + BWI76_RS13565 0.40 +1.0
2,828,179 - BWI76_RS13565 0.41 -0.0
2,828,184 - BWI76_RS13565 0.41 -0.1
2,828,209 + BWI76_RS13565 0.43 -0.4
2,828,209 + BWI76_RS13565 0.43 -1.5
2,828,212 - BWI76_RS13565 0.43 -0.4
2,828,212 - BWI76_RS13565 0.43 -1.1
2,828,217 - BWI76_RS13565 0.44 +0.2
2,828,228 - BWI76_RS13565 0.44 -0.4
2,828,228 - BWI76_RS13565 0.44 -0.2
2,828,263 - BWI76_RS13565 0.47 -0.2
2,828,263 - BWI76_RS13565 0.47 +0.1
2,828,263 - BWI76_RS13565 0.47 +0.1
2,828,263 - BWI76_RS13565 0.47 +0.1
2,828,272 + BWI76_RS13565 0.48 +0.1
2,828,281 - BWI76_RS13565 0.49 -0.0
2,828,307 - BWI76_RS13565 0.50 -0.1
2,828,314 + BWI76_RS13565 0.51 +0.1
2,828,372 - BWI76_RS13565 0.55 -1.4
2,828,383 - BWI76_RS13565 0.56 +2.2
2,828,384 - BWI76_RS13565 0.56 +0.2
2,828,406 + BWI76_RS13565 0.58 +0.6
2,828,414 - BWI76_RS13565 0.59 -0.1
2,828,420 - BWI76_RS13565 0.59 +0.0
2,828,449 + BWI76_RS13565 0.61 -0.1
2,828,498 + BWI76_RS13565 0.65 -2.7
2,828,498 + BWI76_RS13565 0.65 +0.5
2,828,498 + BWI76_RS13565 0.65 +0.9
2,828,498 + BWI76_RS13565 0.65 -0.2
2,828,498 + -1.2
2,828,498 + BWI76_RS13565 0.65 +0.1
2,828,500 + BWI76_RS13565 0.65 -0.4
2,828,506 - BWI76_RS13565 0.66 -0.2
2,828,506 - BWI76_RS13565 0.66 -0.4
2,828,508 - BWI76_RS13565 0.66 -0.6
2,828,513 + BWI76_RS13565 0.66 -2.1
2,828,513 + BWI76_RS13565 0.66 +0.6
2,828,513 + BWI76_RS13565 0.66 -0.2
2,828,513 + BWI76_RS13565 0.66 +0.5
2,828,513 + BWI76_RS13565 0.66 -0.6
2,828,515 + BWI76_RS13565 0.66 +0.2
2,828,521 - BWI76_RS13565 0.67 -0.7
2,828,521 - BWI76_RS13565 0.67 +1.0
2,828,523 - BWI76_RS13565 0.67 +0.1
2,828,527 + BWI76_RS13565 0.67 +0.2
2,828,528 - BWI76_RS13565 0.67 +0.1
2,828,571 + BWI76_RS13565 0.71 +0.1

Or see this region's nucleotide sequence