Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11480

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11475 and BWI76_RS11480 are separated by 47 nucleotidesBWI76_RS11480 and BWI76_RS11485 are separated by 130 nucleotides BWI76_RS11475: BWI76_RS11475 - glycosyl transferase, at 2,414,733 to 2,415,890 _RS11475 BWI76_RS11480: BWI76_RS11480 - hypothetical protein, at 2,415,938 to 2,417,221 _RS11480 BWI76_RS11485: BWI76_RS11485 - serine protein kinase PrkA, at 2,417,352 to 2,419,286 _RS11485 Position (kb) 2415 2416 2417 2418Strain fitness (log2 ratio) -2 -1 0 1 2at 2414.964 kb on - strand, within BWI76_RS11475at 2414.966 kb on + strand, within BWI76_RS11475at 2414.966 kb on + strand, within BWI76_RS11475at 2414.966 kb on + strand, within BWI76_RS11475at 2414.966 kb on + strand, within BWI76_RS11475at 2414.966 kb on + strand, within BWI76_RS11475at 2414.966 kb on + strand, within BWI76_RS11475at 2414.974 kb on - strand, within BWI76_RS11475at 2414.978 kb on + strand, within BWI76_RS11475at 2414.988 kb on + strand, within BWI76_RS11475at 2414.991 kb on - strand, within BWI76_RS11475at 2415.015 kb on + strand, within BWI76_RS11475at 2415.025 kb on + strand, within BWI76_RS11475at 2415.080 kb on - strand, within BWI76_RS11475at 2415.373 kb on + strand, within BWI76_RS11475at 2415.373 kb on + strand, within BWI76_RS11475at 2415.373 kb on + strand, within BWI76_RS11475at 2415.381 kb on - strand, within BWI76_RS11475at 2415.381 kb on - strand, within BWI76_RS11475at 2415.381 kb on - strand, within BWI76_RS11475at 2415.396 kb on - strand, within BWI76_RS11475at 2415.411 kb on - strand, within BWI76_RS11475at 2415.439 kb on + strand, within BWI76_RS11475at 2415.440 kb on - strand, within BWI76_RS11475at 2415.471 kb on + strand, within BWI76_RS11475at 2415.594 kb on + strand, within BWI76_RS11475at 2415.728 kb on + strand, within BWI76_RS11475at 2415.768 kb on + strand, within BWI76_RS11475at 2415.773 kb on + strand, within BWI76_RS11475at 2415.781 kb on - strandat 2415.859 kb on - strandat 2415.936 kb on + strandat 2415.957 kb on - strandat 2416.087 kb on + strand, within BWI76_RS11480at 2416.122 kb on + strand, within BWI76_RS11480at 2416.144 kb on + strand, within BWI76_RS11480at 2416.164 kb on - strand, within BWI76_RS11480at 2416.185 kb on + strand, within BWI76_RS11480at 2416.255 kb on + strand, within BWI76_RS11480at 2416.323 kb on + strand, within BWI76_RS11480at 2416.331 kb on - strand, within BWI76_RS11480at 2416.331 kb on - strand, within BWI76_RS11480at 2416.588 kb on + strand, within BWI76_RS11480at 2416.632 kb on + strand, within BWI76_RS11480at 2416.762 kb on - strand, within BWI76_RS11480at 2416.907 kb on + strand, within BWI76_RS11480at 2416.915 kb on - strand, within BWI76_RS11480at 2417.140 kb on + strandat 2417.219 kb on + strandat 2417.227 kb on - strandat 2417.235 kb on - strandat 2417.336 kb on + strandat 2417.409 kb on + strandat 2417.410 kb on - strandat 2417.789 kb on + strand, within BWI76_RS11485at 2417.790 kb on + strand, within BWI76_RS11485at 2417.821 kb on + strand, within BWI76_RS11485at 2418.170 kb on + strand, within BWI76_RS11485

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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2,414,964 - BWI76_RS11475 0.20 -0.4
2,414,966 + BWI76_RS11475 0.20 -1.9
2,414,966 + BWI76_RS11475 0.20 -0.3
2,414,966 + BWI76_RS11475 0.20 +0.5
2,414,966 + BWI76_RS11475 0.20 +1.5
2,414,966 + BWI76_RS11475 0.20 -0.5
2,414,966 + BWI76_RS11475 0.20 +0.7
2,414,974 - BWI76_RS11475 0.21 -0.9
2,414,978 + BWI76_RS11475 0.21 -1.1
2,414,988 + BWI76_RS11475 0.22 -0.4
2,414,991 - BWI76_RS11475 0.22 +2.1
2,415,015 + BWI76_RS11475 0.24 +0.3
2,415,025 + BWI76_RS11475 0.25 +0.2
2,415,080 - BWI76_RS11475 0.30 -2.1
2,415,373 + BWI76_RS11475 0.55 +0.3
2,415,373 + BWI76_RS11475 0.55 -0.4
2,415,373 + BWI76_RS11475 0.55 +1.1
2,415,381 - BWI76_RS11475 0.56 +0.2
2,415,381 - BWI76_RS11475 0.56 +1.7
2,415,381 - BWI76_RS11475 0.56 +0.0
2,415,396 - BWI76_RS11475 0.57 +0.6
2,415,411 - BWI76_RS11475 0.59 -0.0
2,415,439 + BWI76_RS11475 0.61 -0.6
2,415,440 - BWI76_RS11475 0.61 +0.4
2,415,471 + BWI76_RS11475 0.64 +0.1
2,415,594 + BWI76_RS11475 0.74 +0.1
2,415,728 + BWI76_RS11475 0.86 -0.2
2,415,768 + BWI76_RS11475 0.89 +0.3
2,415,773 + BWI76_RS11475 0.90 +0.5
2,415,781 - -0.4
2,415,859 - +1.5
2,415,936 + -0.7
2,415,957 - +0.5
2,416,087 + BWI76_RS11480 0.12 +0.7
2,416,122 + BWI76_RS11480 0.14 +0.8
2,416,144 + BWI76_RS11480 0.16 +0.1
2,416,164 - BWI76_RS11480 0.18 +0.2
2,416,185 + BWI76_RS11480 0.19 +1.1
2,416,255 + BWI76_RS11480 0.25 -0.6
2,416,323 + BWI76_RS11480 0.30 +0.7
2,416,331 - BWI76_RS11480 0.31 +0.9
2,416,331 - BWI76_RS11480 0.31 +1.2
2,416,588 + BWI76_RS11480 0.51 +1.5
2,416,632 + BWI76_RS11480 0.54 -0.2
2,416,762 - BWI76_RS11480 0.64 -0.4
2,416,907 + BWI76_RS11480 0.75 +0.3
2,416,915 - BWI76_RS11480 0.76 +1.4
2,417,140 + +0.1
2,417,219 + +0.3
2,417,227 - +0.2
2,417,235 - +0.1
2,417,336 + +0.4
2,417,409 + +0.3
2,417,410 - +0.9
2,417,789 + BWI76_RS11485 0.23 +0.2
2,417,790 + BWI76_RS11485 0.23 -0.4
2,417,821 + BWI76_RS11485 0.24 +1.7
2,418,170 + BWI76_RS11485 0.42 +0.7

Or see this region's nucleotide sequence