Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11455

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11450 and BWI76_RS11455 are separated by 100 nucleotidesBWI76_RS11455 and BWI76_RS11460 overlap by 17 nucleotidesBWI76_RS11460 and BWI76_RS11465 are separated by 152 nucleotides BWI76_RS11450: BWI76_RS11450 - cyanate MFS transporter, at 2,409,682 to 2,410,866 _RS11450 BWI76_RS11455: BWI76_RS11455 - AraC family transcriptional regulator, at 2,410,967 to 2,411,758 _RS11455 BWI76_RS11460: BWI76_RS11460 - DUF441 family protein, at 2,411,742 to 2,412,188 _RS11460 BWI76_RS11465: BWI76_RS11465 - hypothetical protein, at 2,412,341 to 2,412,841 _RS11465 Position (kb) 2410 2411 2412Strain fitness (log2 ratio) -1 0 1at 2410.009 kb on + strand, within BWI76_RS11450at 2410.017 kb on - strand, within BWI76_RS11450at 2410.579 kb on + strand, within BWI76_RS11450at 2410.592 kb on - strand, within BWI76_RS11450at 2410.592 kb on - strand, within BWI76_RS11450at 2410.623 kb on + strand, within BWI76_RS11450at 2410.726 kb on + strand, within BWI76_RS11450at 2410.837 kb on + strandat 2411.331 kb on + strand, within BWI76_RS11455at 2411.569 kb on - strand, within BWI76_RS11455at 2411.656 kb on - strand, within BWI76_RS11455at 2411.861 kb on + strand, within BWI76_RS11460at 2412.074 kb on + strand, within BWI76_RS11460at 2412.164 kb on - strandat 2412.181 kb on - strandat 2412.197 kb on - strandat 2412.197 kb on - strandat 2412.367 kb on + strandat 2412.558 kb on + strand, within BWI76_RS11465at 2412.680 kb on + strand, within BWI76_RS11465at 2412.696 kb on + strand, within BWI76_RS11465

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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2,410,009 + BWI76_RS11450 0.28 -0.4
2,410,017 - BWI76_RS11450 0.28 +0.2
2,410,579 + BWI76_RS11450 0.76 -1.3
2,410,592 - BWI76_RS11450 0.77 -0.1
2,410,592 - BWI76_RS11450 0.77 +0.5
2,410,623 + BWI76_RS11450 0.79 +0.4
2,410,726 + BWI76_RS11450 0.88 -0.3
2,410,837 + -0.2
2,411,331 + BWI76_RS11455 0.46 -0.0
2,411,569 - BWI76_RS11455 0.76 +1.0
2,411,656 - BWI76_RS11455 0.87 +0.7
2,411,861 + BWI76_RS11460 0.27 +0.7
2,412,074 + BWI76_RS11460 0.74 +0.2
2,412,164 - +0.5
2,412,181 - +0.3
2,412,197 - +0.6
2,412,197 - -0.8
2,412,367 + +0.3
2,412,558 + BWI76_RS11465 0.43 -0.6
2,412,680 + BWI76_RS11465 0.68 -0.1
2,412,696 + BWI76_RS11465 0.71 +0.5

Or see this region's nucleotide sequence