Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11110

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS11100 and BWI76_RS11105 are separated by 143 nucleotidesBWI76_RS11105 and BWI76_RS11110 are separated by 2 nucleotidesBWI76_RS11110 and BWI76_RS11115 overlap by 11 nucleotidesBWI76_RS11115 and BWI76_RS11120 overlap by 4 nucleotides BWI76_RS11100: BWI76_RS11100 - beta-ketoacyl-[acyl-carrier-protein] synthase II, at 2,340,607 to 2,341,848 _RS11100 BWI76_RS11105: BWI76_RS11105 - aminodeoxychorismate lyase, at 2,341,992 to 2,342,801 _RS11105 BWI76_RS11110: BWI76_RS11110 - cell division protein YceG, at 2,342,804 to 2,343,826 _RS11110 BWI76_RS11115: BWI76_RS11115 - dTMP kinase, at 2,343,816 to 2,344,457 _RS11115 BWI76_RS11120: BWI76_RS11120 - DNA polymerase III subunit delta', at 2,344,454 to 2,345,458 _RS11120 Position (kb) 2342 2343 2344Strain fitness (log2 ratio) -1 0 1at 2341.842 kb on + strandat 2342.422 kb on - strand, within BWI76_RS11105at 2342.551 kb on + strand, within BWI76_RS11105at 2342.551 kb on + strand, within BWI76_RS11105at 2343.218 kb on + strand, within BWI76_RS11110at 2343.252 kb on - strand, within BWI76_RS11110

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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2,341,842 + -0.2
2,342,422 - BWI76_RS11105 0.53 +0.3
2,342,551 + BWI76_RS11105 0.69 -0.2
2,342,551 + BWI76_RS11105 0.69 +1.5
2,343,218 + BWI76_RS11110 0.40 +0.8
2,343,252 - BWI76_RS11110 0.44 +0.4

Or see this region's nucleotide sequence