Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS10855

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS10850 and BWI76_RS10855 are separated by 78 nucleotidesBWI76_RS10855 and BWI76_RS10860 overlap by 4 nucleotides BWI76_RS10850: BWI76_RS10850 - two-component sensor histidine kinase, at 2,292,109 to 2,293,305 _RS10850 BWI76_RS10855: BWI76_RS10855 - RND family efflux transporter MFP subunit, at 2,293,384 to 2,294,532 _RS10855 BWI76_RS10860: BWI76_RS10860 - ACR family transporter, at 2,294,529 to 2,297,603 _RS10860 Position (kb) 2293 2294 2295Strain fitness (log2 ratio) -1 0 1 2at 2292.438 kb on + strand, within BWI76_RS10850at 2292.729 kb on + strand, within BWI76_RS10850at 2292.958 kb on + strand, within BWI76_RS10850at 2293.394 kb on + strandat 2293.427 kb on - strandat 2293.486 kb on + strandat 2293.656 kb on + strand, within BWI76_RS10855at 2294.037 kb on - strand, within BWI76_RS10855at 2294.638 kb on + strandat 2294.638 kb on + strandat 2294.644 kb on - strandat 2295.155 kb on - strandat 2295.263 kb on - strand, within BWI76_RS10860at 2295.496 kb on + strand, within BWI76_RS10860at 2295.496 kb on + strand, within BWI76_RS10860at 2295.496 kb on + strand, within BWI76_RS10860

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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2,292,438 + BWI76_RS10850 0.27 +0.1
2,292,729 + BWI76_RS10850 0.52 +0.4
2,292,958 + BWI76_RS10850 0.71 -0.1
2,293,394 + +0.6
2,293,427 - +1.4
2,293,486 + +0.2
2,293,656 + BWI76_RS10855 0.24 +0.4
2,294,037 - BWI76_RS10855 0.57 +0.6
2,294,638 + +1.7
2,294,638 + +0.7
2,294,644 - +0.0
2,295,155 - -1.3
2,295,263 - BWI76_RS10860 0.24 +1.0
2,295,496 + BWI76_RS10860 0.31 +1.5
2,295,496 + BWI76_RS10860 0.31 +2.1
2,295,496 + BWI76_RS10860 0.31 +0.3

Or see this region's nucleotide sequence