Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10695 and BWI76_RS10700 are separated by 245 nucleotides BWI76_RS10700 and BWI76_RS10705 are separated by 25 nucleotides BWI76_RS10705 and BWI76_RS10710 are separated by 212 nucleotides
BWI76_RS10695: BWI76_RS10695 - aldehyde dehydrogenase PuuC, at 2,260,130 to 2,261,617
_RS10695
BWI76_RS10700: BWI76_RS10700 - XRE family transcriptional regulator, at 2,261,863 to 2,262,420
_RS10700
BWI76_RS10705: BWI76_RS10705 - Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) , at 2,262,446 to 2,263,210
_RS10705
BWI76_RS10710: BWI76_RS10710 - Glutamate--putrescine ligase (EC 6.3.1.11) (from data) , at 2,263,423 to 2,264,841
_RS10710
Position (kb)
2262
2263
2264 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2261.470 kb on + strand at 2261.516 kb on + strand at 2261.696 kb on + strand at 2262.144 kb on - strand, within BWI76_RS10700 at 2262.196 kb on - strand, within BWI76_RS10700 at 2262.321 kb on + strand, within BWI76_RS10700 at 2262.329 kb on - strand, within BWI76_RS10700 at 2262.473 kb on + strand at 2262.543 kb on + strand, within BWI76_RS10705 at 2262.563 kb on + strand, within BWI76_RS10705 at 2262.639 kb on - strand, within BWI76_RS10705 at 2262.796 kb on - strand, within BWI76_RS10705 at 2262.916 kb on + strand, within BWI76_RS10705 at 2262.928 kb on + strand, within BWI76_RS10705 at 2263.134 kb on + strand at 2263.506 kb on + strand at 2263.506 kb on + strand at 2264.061 kb on + strand, within BWI76_RS10710 at 2264.127 kb on + strand, within BWI76_RS10710 at 2264.135 kb on + strand, within BWI76_RS10710
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 2,261,470 + +0.1 2,261,516 + +0.2 2,261,696 + -3.5 2,262,144 - BWI76_RS10700 0.50 +1.0 2,262,196 - BWI76_RS10700 0.60 +0.7 2,262,321 + BWI76_RS10700 0.82 +1.0 2,262,329 - BWI76_RS10700 0.84 +2.4 2,262,473 + +1.4 2,262,543 + BWI76_RS10705 0.13 +0.8 2,262,563 + BWI76_RS10705 0.15 +1.7 2,262,639 - BWI76_RS10705 0.25 -0.6 2,262,796 - BWI76_RS10705 0.46 -0.1 2,262,916 + BWI76_RS10705 0.61 -0.1 2,262,928 + BWI76_RS10705 0.63 +0.7 2,263,134 + +0.4 2,263,506 + -0.1 2,263,506 + -0.5 2,264,061 + BWI76_RS10710 0.45 -0.7 2,264,127 + BWI76_RS10710 0.50 +0.9 2,264,135 + BWI76_RS10710 0.50 +0.7
Or see this region's nucleotide sequence