Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09510 and BWI76_RS09515 are separated by 6 nucleotides BWI76_RS09515 and BWI76_RS09520 are separated by 19 nucleotides BWI76_RS09520 and BWI76_RS09525 are separated by 227 nucleotides BWI76_RS09525 and BWI76_RS09530 are separated by 117 nucleotides
BWI76_RS09510: BWI76_RS09510 - arginine transporter permease subunit ArtQ, at 1,990,504 to 1,991,220
_RS09510
BWI76_RS09515: BWI76_RS09515 - arginine ABC transporter substrate-binding protein, at 1,991,227 to 1,991,958
_RS09515
BWI76_RS09520: BWI76_RS09520 - arginine ABC transporter ATP-binding protein ArtP, at 1,991,978 to 1,992,706
_RS09520
BWI76_RS09525: BWI76_RS09525 - lipoprotein, at 1,992,934 to 1,993,449
_RS09525
BWI76_RS09530: BWI76_RS09530 - hypothetical protein, at 1,993,567 to 1,993,890
_RS09530
Position (kb)
1991
1992
1993 Strain fitness (log2 ratio)
-1
0
1 at 1991.614 kb on - strand, within BWI76_RS09515 at 1991.655 kb on - strand, within BWI76_RS09515 at 1991.797 kb on - strand, within BWI76_RS09515 at 1992.117 kb on + strand, within BWI76_RS09520 at 1992.383 kb on + strand, within BWI76_RS09520 at 1992.421 kb on - strand, within BWI76_RS09520 at 1992.655 kb on - strand at 1992.704 kb on + strand at 1992.704 kb on + strand at 1992.712 kb on - strand at 1992.983 kb on + strand at 1992.983 kb on - strand at 1993.013 kb on + strand, within BWI76_RS09525 at 1993.021 kb on - strand, within BWI76_RS09525 at 1993.026 kb on - strand, within BWI76_RS09525 at 1993.155 kb on + strand, within BWI76_RS09525 at 1993.417 kb on + strand at 1993.420 kb on - strand at 1993.425 kb on - strand at 1993.444 kb on - strand at 1993.498 kb on + strand at 1993.500 kb on + strand at 1993.533 kb on - strand at 1993.590 kb on + strand at 1993.597 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 1,991,614 - BWI76_RS09515 0.53 +0.0 1,991,655 - BWI76_RS09515 0.58 +0.6 1,991,797 - BWI76_RS09515 0.78 -0.0 1,992,117 + BWI76_RS09520 0.19 +1.1 1,992,383 + BWI76_RS09520 0.56 -1.0 1,992,421 - BWI76_RS09520 0.61 +0.9 1,992,655 - -0.6 1,992,704 + -0.4 1,992,704 + -0.3 1,992,712 - +0.3 1,992,983 + -0.3 1,992,983 - +0.1 1,993,013 + BWI76_RS09525 0.15 +0.6 1,993,021 - BWI76_RS09525 0.17 -0.4 1,993,026 - BWI76_RS09525 0.18 -0.6 1,993,155 + BWI76_RS09525 0.43 -0.2 1,993,417 + +0.1 1,993,420 - -0.2 1,993,425 - +0.2 1,993,444 - -0.8 1,993,498 + -0.4 1,993,500 + +0.9 1,993,533 - +0.5 1,993,590 + +0.8 1,993,597 + -0.9
Or see this region's nucleotide sequence