Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS06290

Experiment: 2-Deoxyadenosine 4 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS06280 and BWI76_RS06285 are separated by 47 nucleotidesBWI76_RS06285 and BWI76_RS06290 are separated by 170 nucleotidesBWI76_RS06290 and BWI76_RS06295 are separated by 91 nucleotides BWI76_RS06280: BWI76_RS06280 - hypothetical protein, at 1,322,124 to 1,323,518 _RS06280 BWI76_RS06285: BWI76_RS06285 - peroxiredoxin, at 1,323,566 to 1,324,168 _RS06285 BWI76_RS06290: BWI76_RS06290 - ACP phosphodiesterase, at 1,324,339 to 1,324,920 _RS06290 BWI76_RS06295: BWI76_RS06295 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 1,325,012 to 1,326,082 _RS06295 Position (kb) 1324 1325Strain fitness (log2 ratio) -1 0 1at 1323.360 kb on - strand, within BWI76_RS06280at 1323.399 kb on + strandat 1323.696 kb on + strand, within BWI76_RS06285at 1323.804 kb on - strand, within BWI76_RS06285at 1323.832 kb on - strand, within BWI76_RS06285at 1323.898 kb on + strand, within BWI76_RS06285at 1323.906 kb on + strand, within BWI76_RS06285at 1324.017 kb on - strand, within BWI76_RS06285at 1324.044 kb on + strand, within BWI76_RS06285at 1324.237 kb on - strandat 1324.530 kb on + strand, within BWI76_RS06290at 1325.098 kb on + strandat 1325.367 kb on + strand, within BWI76_RS06295at 1325.389 kb on + strand, within BWI76_RS06295at 1325.503 kb on + strand, within BWI76_RS06295at 1325.563 kb on - strand, within BWI76_RS06295at 1325.675 kb on - strand, within BWI76_RS06295at 1325.827 kb on + strand, within BWI76_RS06295at 1325.907 kb on + strand, within BWI76_RS06295

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C)
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1,323,360 - BWI76_RS06280 0.89 +0.6
1,323,399 + -0.3
1,323,696 + BWI76_RS06285 0.22 -0.1
1,323,804 - BWI76_RS06285 0.39 +0.0
1,323,832 - BWI76_RS06285 0.44 -0.3
1,323,898 + BWI76_RS06285 0.55 -0.8
1,323,906 + BWI76_RS06285 0.56 +0.4
1,324,017 - BWI76_RS06285 0.75 +0.9
1,324,044 + BWI76_RS06285 0.79 -1.7
1,324,237 - +0.7
1,324,530 + BWI76_RS06290 0.33 +1.0
1,325,098 + -0.3
1,325,367 + BWI76_RS06295 0.33 +0.0
1,325,389 + BWI76_RS06295 0.35 -0.5
1,325,503 + BWI76_RS06295 0.46 -0.2
1,325,563 - BWI76_RS06295 0.51 +0.6
1,325,675 - BWI76_RS06295 0.62 -0.1
1,325,827 + BWI76_RS06295 0.76 +0.4
1,325,907 + BWI76_RS06295 0.84 -0.5

Or see this region's nucleotide sequence