Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS05040 and BWI76_RS05045 overlap by 11 nucleotides BWI76_RS05045 and BWI76_RS05050 overlap by 8 nucleotides BWI76_RS05050 and BWI76_RS05055 overlap by 8 nucleotides BWI76_RS05055 and BWI76_RS05060 overlap by 4 nucleotides
BWI76_RS05040: BWI76_RS05040 - type II secretion system protein N, at 1,057,283 to 1,058,041
_RS05040
BWI76_RS05045: BWI76_RS05045 - general secretion pathway protein GspM, at 1,058,031 to 1,058,516
_RS05045
BWI76_RS05050: BWI76_RS05050 - general secretion pathway protein GspL, at 1,058,509 to 1,059,705
_RS05050
BWI76_RS05055: BWI76_RS05055 - type II secretion system protein K, at 1,059,698 to 1,060,678
_RS05055
BWI76_RS05060: BWI76_RS05060 - type II secretion system protein GspJ, at 1,060,675 to 1,061,271
_RS05060
Position (kb)
1058
1059
1060 Strain fitness (log2 ratio)
-2
-1
0
1 at 1057.520 kb on + strand, within BWI76_RS05040 at 1057.946 kb on - strand, within BWI76_RS05040 at 1058.457 kb on - strand, within BWI76_RS05045 at 1058.457 kb on - strand, within BWI76_RS05045 at 1058.541 kb on + strand at 1058.616 kb on + strand at 1058.624 kb on - strand at 1058.624 kb on - strand at 1059.018 kb on + strand, within BWI76_RS05050 at 1059.306 kb on + strand, within BWI76_RS05050 at 1059.306 kb on + strand, within BWI76_RS05050 at 1059.533 kb on - strand, within BWI76_RS05050 at 1059.797 kb on + strand, within BWI76_RS05055 at 1059.970 kb on + strand, within BWI76_RS05055 at 1060.020 kb on + strand, within BWI76_RS05055 at 1060.020 kb on + strand, within BWI76_RS05055 at 1060.020 kb on + strand, within BWI76_RS05055 at 1060.106 kb on - strand, within BWI76_RS05055 at 1060.181 kb on - strand, within BWI76_RS05055 at 1060.242 kb on + strand, within BWI76_RS05055 at 1060.267 kb on + strand, within BWI76_RS05055 at 1060.311 kb on + strand, within BWI76_RS05055 at 1060.348 kb on + strand, within BWI76_RS05055 at 1060.371 kb on - strand, within BWI76_RS05055 at 1060.438 kb on + strand at 1060.445 kb on + strand, within BWI76_RS05055 at 1060.453 kb on - strand, within BWI76_RS05055 at 1060.607 kb on + strand at 1060.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 1,057,520 + BWI76_RS05040 0.31 -0.5 1,057,946 - BWI76_RS05040 0.87 -1.0 1,058,457 - BWI76_RS05045 0.88 -1.0 1,058,457 - BWI76_RS05045 0.88 -0.0 1,058,541 + -0.5 1,058,616 + +1.1 1,058,624 - +0.6 1,058,624 - +0.6 1,059,018 + BWI76_RS05050 0.43 +1.6 1,059,306 + BWI76_RS05050 0.67 +0.5 1,059,306 + BWI76_RS05050 0.67 +0.2 1,059,533 - BWI76_RS05050 0.86 +0.7 1,059,797 + BWI76_RS05055 0.10 +0.1 1,059,970 + BWI76_RS05055 0.28 +0.2 1,060,020 + BWI76_RS05055 0.33 -0.6 1,060,020 + BWI76_RS05055 0.33 -0.1 1,060,020 + BWI76_RS05055 0.33 -1.0 1,060,106 - BWI76_RS05055 0.42 +0.3 1,060,181 - BWI76_RS05055 0.49 +0.3 1,060,242 + BWI76_RS05055 0.55 +0.7 1,060,267 + BWI76_RS05055 0.58 -0.2 1,060,311 + BWI76_RS05055 0.62 -1.8 1,060,348 + BWI76_RS05055 0.66 +0.8 1,060,371 - BWI76_RS05055 0.69 +0.1 1,060,438 + +1.6 1,060,445 + BWI76_RS05055 0.76 +0.8 1,060,453 - BWI76_RS05055 0.77 +0.5 1,060,607 + +0.3 1,060,649 - +0.0
Or see this region's nucleotide sequence