Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04965 and BWI76_RS04970 overlap by 4 nucleotides BWI76_RS04970 and BWI76_RS04975 are separated by 121 nucleotides BWI76_RS04975 and BWI76_RS04980 are separated by 57 nucleotides
BWI76_RS04965: BWI76_RS04965 - ABC transporter ATP-binding protein, at 1,042,941 to 1,043,867
_RS04965
BWI76_RS04970: BWI76_RS04970 - ABC transporter permease, at 1,043,864 to 1,044,634
_RS04970
BWI76_RS04975: BWI76_RS04975 - PTS fructose subfamily transporter subunit IIA, at 1,044,756 to 1,045,196
_RS04975
BWI76_RS04980: BWI76_RS04980 - hypothetical protein, at 1,045,254 to 1,046,507
_RS04980
Position (kb) 1044
1045
1046 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1043.784 kb on - strand at 1044.143 kb on - strand, within BWI76_RS04970 at 1044.297 kb on + strand, within BWI76_RS04970 at 1044.305 kb on - strand, within BWI76_RS04970 at 1044.654 kb on + strand at 1044.842 kb on + strand, within BWI76_RS04975 at 1044.959 kb on - strand, within BWI76_RS04975 at 1045.356 kb on - strand at 1045.436 kb on - strand, within BWI76_RS04980 at 1045.514 kb on - strand, within BWI76_RS04980 at 1045.691 kb on + strand, within BWI76_RS04980 at 1045.699 kb on - strand, within BWI76_RS04980 at 1045.904 kb on + strand, within BWI76_RS04980 at 1045.912 kb on - strand, within BWI76_RS04980 at 1045.912 kb on - strand, within BWI76_RS04980 at 1046.015 kb on + strand, within BWI76_RS04980 at 1046.017 kb on - strand, within BWI76_RS04980
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 1,043,784 - +0.1 1,044,143 - BWI76_RS04970 0.36 -0.2 1,044,297 + BWI76_RS04970 0.56 -0.2 1,044,305 - BWI76_RS04970 0.57 -2.9 1,044,654 + +1.4 1,044,842 + BWI76_RS04975 0.20 +0.3 1,044,959 - BWI76_RS04975 0.46 +1.0 1,045,356 - -1.2 1,045,436 - BWI76_RS04980 0.15 -1.7 1,045,514 - BWI76_RS04980 0.21 +0.1 1,045,691 + BWI76_RS04980 0.35 +1.5 1,045,699 - BWI76_RS04980 0.35 -1.1 1,045,904 + BWI76_RS04980 0.52 -2.0 1,045,912 - BWI76_RS04980 0.52 -0.8 1,045,912 - BWI76_RS04980 0.52 +0.1 1,046,015 + BWI76_RS04980 0.61 +0.2 1,046,017 - BWI76_RS04980 0.61 -1.0
Or see this region's nucleotide sequence