Experiment: 2-Deoxyadenosine 4 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01850 and BWI76_RS01855 are separated by 188 nucleotides BWI76_RS01855 and BWI76_RS01860 are separated by 12 nucleotides BWI76_RS01860 and BWI76_RS01865 are separated by 98 nucleotides
BWI76_RS01850: BWI76_RS01850 - maltose operon protein MalM, at 377,462 to 378,394
_RS01850
BWI76_RS01855: BWI76_RS01855 - chorismate lyase, at 378,583 to 379,080
_RS01855
BWI76_RS01860: BWI76_RS01860 - 4-hydroxybenzoate octaprenyltransferase, at 379,093 to 379,962
_RS01860
BWI76_RS01865: BWI76_RS01865 - glycerol-3-phosphate 1-O-acyltransferase, at 380,061 to 382,484
_RS01865
Position (kb) 378
379
380 Strain fitness (log2 ratio) -2
-1
0
1 at 377.608 kb on + strand, within BWI76_RS01850 at 377.782 kb on - strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 377.998 kb on + strand, within BWI76_RS01850 at 378.006 kb on - strand, within BWI76_RS01850 at 378.093 kb on + strand, within BWI76_RS01850 at 378.108 kb on + strand, within BWI76_RS01850 at 378.383 kb on - strand at 378.398 kb on + strand at 378.427 kb on + strand at 378.427 kb on + strand at 378.435 kb on - strand at 378.887 kb on + strand, within BWI76_RS01855 at 378.895 kb on - strand, within BWI76_RS01855 at 379.069 kb on + strand at 380.039 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxyadenosine 4 mM (C) remove 377,608 + BWI76_RS01850 0.16 +0.5 377,782 - BWI76_RS01850 0.34 -0.8 377,998 + BWI76_RS01850 0.57 +0.7 377,998 + BWI76_RS01850 0.57 +0.1 377,998 + BWI76_RS01850 0.57 -0.0 378,006 - BWI76_RS01850 0.58 +0.2 378,093 + BWI76_RS01850 0.68 +0.2 378,108 + BWI76_RS01850 0.69 -0.1 378,383 - -1.8 378,398 + +0.4 378,427 + -1.5 378,427 + +0.0 378,435 - -0.3 378,887 + BWI76_RS01855 0.61 +0.3 378,895 - BWI76_RS01855 0.63 +1.4 379,069 + +0.7 380,039 + +0.1
Or see this region's nucleotide sequence