Experiment: KB with Mexicanolide 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4686 and Psyr_4687 are separated by 64 nucleotides Psyr_4687 and Psyr_4688 are separated by 90 nucleotides Psyr_4688 and Psyr_4689 are separated by 138 nucleotides
Psyr_4686: Psyr_4686 - 8-amino-7-oxononanoate synthase, at 5,553,587 to 5,554,777
_4686
Psyr_4687: Psyr_4687 - biotin synthase, at 5,554,842 to 5,555,900
_4687
Psyr_4688: Psyr_4688 - Phosphoribosyltransferase, at 5,555,991 to 5,556,725
_4688
Psyr_4689: Psyr_4689 - Helix-turn-helix, Fis-type:Molybdenum-binding protein, N-terminal:Molybdenum-pterin binding protein, at 5,556,864 to 5,557,628
_4689
Position (kb) 5554
5555
5556 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5553.987 kb on + strand, within Psyr_4686 at 5553.987 kb on + strand, within Psyr_4686 at 5553.987 kb on + strand, within Psyr_4686 at 5553.987 kb on + strand, within Psyr_4686 at 5553.987 kb on + strand, within Psyr_4686 at 5553.988 kb on - strand, within Psyr_4686 at 5553.988 kb on - strand, within Psyr_4686 at 5553.988 kb on - strand, within Psyr_4686 at 5553.988 kb on - strand, within Psyr_4686 at 5553.993 kb on + strand, within Psyr_4686 at 5553.993 kb on + strand, within Psyr_4686 at 5553.994 kb on - strand, within Psyr_4686 at 5554.458 kb on + strand, within Psyr_4686 at 5554.458 kb on + strand, within Psyr_4686 at 5554.458 kb on + strand, within Psyr_4686 at 5554.459 kb on - strand, within Psyr_4686 at 5554.459 kb on - strand, within Psyr_4686 at 5554.459 kb on - strand, within Psyr_4686 at 5554.459 kb on - strand, within Psyr_4686 at 5554.638 kb on + strand, within Psyr_4686 at 5554.638 kb on + strand, within Psyr_4686 at 5554.638 kb on + strand, within Psyr_4686 at 5554.639 kb on - strand, within Psyr_4686 at 5554.639 kb on - strand, within Psyr_4686 at 5554.639 kb on - strand, within Psyr_4686 at 5554.639 kb on - strand, within Psyr_4686 at 5554.861 kb on + strand at 5554.861 kb on + strand at 5554.861 kb on + strand at 5554.861 kb on + strand at 5554.862 kb on - strand at 5554.862 kb on - strand at 5554.862 kb on - strand at 5554.862 kb on - strand at 5555.026 kb on + strand, within Psyr_4687 at 5555.129 kb on + strand, within Psyr_4687 at 5555.129 kb on + strand, within Psyr_4687 at 5555.129 kb on + strand at 5555.129 kb on + strand, within Psyr_4687 at 5555.130 kb on - strand, within Psyr_4687 at 5555.130 kb on - strand, within Psyr_4687 at 5555.130 kb on - strand, within Psyr_4687 at 5555.130 kb on - strand, within Psyr_4687 at 5555.347 kb on + strand, within Psyr_4687 at 5555.347 kb on + strand, within Psyr_4687 at 5555.347 kb on + strand, within Psyr_4687 at 5555.347 kb on + strand, within Psyr_4687 at 5555.347 kb on + strand, within Psyr_4687 at 5555.347 kb on + strand, within Psyr_4687 at 5555.348 kb on - strand, within Psyr_4687 at 5555.348 kb on - strand, within Psyr_4687 at 5555.348 kb on - strand, within Psyr_4687 at 5555.348 kb on - strand, within Psyr_4687 at 5555.348 kb on - strand, within Psyr_4687 at 5555.348 kb on - strand, within Psyr_4687 at 5555.374 kb on + strand, within Psyr_4687 at 5555.390 kb on + strand, within Psyr_4687 at 5555.390 kb on + strand, within Psyr_4687 at 5555.391 kb on - strand, within Psyr_4687 at 5555.434 kb on + strand, within Psyr_4687 at 5555.434 kb on + strand at 5555.434 kb on + strand, within Psyr_4687 at 5555.434 kb on + strand, within Psyr_4687 at 5555.434 kb on + strand, within Psyr_4687 at 5555.434 kb on + strand, within Psyr_4687 at 5555.434 kb on + strand, within Psyr_4687 at 5555.435 kb on - strand, within Psyr_4687 at 5555.435 kb on - strand, within Psyr_4687 at 5555.435 kb on - strand, within Psyr_4687 at 5555.435 kb on - strand, within Psyr_4687 at 5555.437 kb on + strand, within Psyr_4687 at 5555.438 kb on - strand, within Psyr_4687 at 5555.438 kb on - strand, within Psyr_4687 at 5555.548 kb on + strand, within Psyr_4687 at 5555.548 kb on + strand, within Psyr_4687 at 5555.549 kb on - strand, within Psyr_4687 at 5555.549 kb on - strand, within Psyr_4687 at 5555.549 kb on - strand, within Psyr_4687 at 5555.549 kb on - strand, within Psyr_4687 at 5555.686 kb on + strand, within Psyr_4687 at 5555.687 kb on - strand, within Psyr_4687 at 5555.707 kb on + strand, within Psyr_4687 at 5555.708 kb on - strand, within Psyr_4687 at 5555.708 kb on - strand, within Psyr_4687 at 5555.708 kb on - strand, within Psyr_4687 at 5555.833 kb on - strand at 5555.975 kb on + strand at 5555.975 kb on + strand at 5555.975 kb on + strand at 5555.975 kb on + strand at 5555.975 kb on + strand at 5555.975 kb on + strand at 5555.975 kb on + strand at 5555.975 kb on + strand at 5555.976 kb on - strand at 5555.976 kb on - strand at 5555.976 kb on - strand at 5555.976 kb on - strand at 5555.976 kb on - strand at 5555.976 kb on - strand at 5555.980 kb on - strand at 5555.980 kb on - strand at 5556.025 kb on - strand at 5556.058 kb on + strand at 5556.058 kb on + strand at 5556.058 kb on + strand at 5556.058 kb on + strand at 5556.058 kb on + strand at 5556.058 kb on + strand at 5556.059 kb on - strand at 5556.059 kb on - strand at 5556.059 kb on - strand at 5556.234 kb on + strand, within Psyr_4688 at 5556.235 kb on - strand, within Psyr_4688 at 5556.276 kb on - strand, within Psyr_4688 at 5556.282 kb on - strand, within Psyr_4688 at 5556.325 kb on - strand, within Psyr_4688 at 5556.325 kb on - strand, within Psyr_4688 at 5556.415 kb on - strand, within Psyr_4688 at 5556.415 kb on - strand, within Psyr_4688 at 5556.656 kb on - strand at 5556.690 kb on + strand at 5556.690 kb on + strand at 5556.691 kb on - strand at 5556.691 kb on - strand at 5556.691 kb on - strand at 5556.691 kb on - strand at 5556.741 kb on + strand at 5556.741 kb on + strand at 5556.742 kb on - strand at 5556.744 kb on + strand at 5556.744 kb on + strand at 5556.744 kb on + strand at 5556.744 kb on + strand at 5556.744 kb on + strand at 5556.745 kb on - strand at 5556.745 kb on - strand at 5556.745 kb on - strand at 5556.745 kb on - strand at 5556.745 kb on - strand at 5556.829 kb on + strand at 5556.829 kb on + strand at 5556.880 kb on + strand at 5556.880 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mexicanolide 10 mM remove 5,553,987 + Psyr_4686 0.34 +0.3 5,553,987 + Psyr_4686 0.34 -2.9 5,553,987 + Psyr_4686 0.34 -2.1 5,553,987 + Psyr_4686 0.34 -1.1 5,553,987 + Psyr_4686 0.34 -1.2 5,553,988 - Psyr_4686 0.34 -1.1 5,553,988 - Psyr_4686 0.34 -0.2 5,553,988 - Psyr_4686 0.34 -2.1 5,553,988 - Psyr_4686 0.34 -1.7 5,553,993 + Psyr_4686 0.34 -0.6 5,553,993 + Psyr_4686 0.34 -1.7 5,553,994 - Psyr_4686 0.34 -1.6 5,554,458 + Psyr_4686 0.73 -2.3 5,554,458 + Psyr_4686 0.73 -2.7 5,554,458 + Psyr_4686 0.73 -1.6 5,554,459 - Psyr_4686 0.73 +0.1 5,554,459 - Psyr_4686 0.73 -1.3 5,554,459 - Psyr_4686 0.73 -0.3 5,554,459 - Psyr_4686 0.73 -0.1 5,554,638 + Psyr_4686 0.88 -1.9 5,554,638 + Psyr_4686 0.88 -0.5 5,554,638 + Psyr_4686 0.88 -1.9 5,554,639 - Psyr_4686 0.88 -1.6 5,554,639 - Psyr_4686 0.88 -1.9 5,554,639 - Psyr_4686 0.88 -0.3 5,554,639 - Psyr_4686 0.88 -3.0 5,554,861 + -2.3 5,554,861 + -1.6 5,554,861 + +1.3 5,554,861 + +0.3 5,554,862 - -0.3 5,554,862 - -0.2 5,554,862 - -0.0 5,554,862 - +0.4 5,555,026 + Psyr_4687 0.17 -1.6 5,555,129 + Psyr_4687 0.27 -1.1 5,555,129 + Psyr_4687 0.27 +0.3 5,555,129 + -1.6 5,555,129 + Psyr_4687 0.27 +0.3 5,555,130 - Psyr_4687 0.27 -2.7 5,555,130 - Psyr_4687 0.27 +0.3 5,555,130 - Psyr_4687 0.27 -1.1 5,555,130 - Psyr_4687 0.27 -2.3 5,555,347 + Psyr_4687 0.48 -2.2 5,555,347 + Psyr_4687 0.48 -0.3 5,555,347 + Psyr_4687 0.48 +0.7 5,555,347 + Psyr_4687 0.48 -2.7 5,555,347 + Psyr_4687 0.48 -0.3 5,555,347 + Psyr_4687 0.48 -2.1 5,555,348 - Psyr_4687 0.48 +0.6 5,555,348 - Psyr_4687 0.48 +2.3 5,555,348 - Psyr_4687 0.48 -0.3 5,555,348 - Psyr_4687 0.48 +1.8 5,555,348 - Psyr_4687 0.48 -0.7 5,555,348 - Psyr_4687 0.48 -1.2 5,555,374 + Psyr_4687 0.50 +1.3 5,555,390 + Psyr_4687 0.52 -2.2 5,555,390 + Psyr_4687 0.52 -1.6 5,555,391 - Psyr_4687 0.52 +0.3 5,555,434 + Psyr_4687 0.56 -1.9 5,555,434 + -0.3 5,555,434 + Psyr_4687 0.56 -1.2 5,555,434 + Psyr_4687 0.56 -2.3 5,555,434 + Psyr_4687 0.56 -3.0 5,555,434 + Psyr_4687 0.56 -1.9 5,555,434 + Psyr_4687 0.56 -2.6 5,555,435 - Psyr_4687 0.56 -0.3 5,555,435 - Psyr_4687 0.56 +0.3 5,555,435 - Psyr_4687 0.56 -0.9 5,555,435 - Psyr_4687 0.56 -2.3 5,555,437 + Psyr_4687 0.56 +1.3 5,555,438 - Psyr_4687 0.56 -1.6 5,555,438 - Psyr_4687 0.56 -0.1 5,555,548 + Psyr_4687 0.67 -1.1 5,555,548 + Psyr_4687 0.67 -0.2 5,555,549 - Psyr_4687 0.67 +0.3 5,555,549 - Psyr_4687 0.67 -2.2 5,555,549 - Psyr_4687 0.67 -3.4 5,555,549 - Psyr_4687 0.67 -2.8 5,555,686 + Psyr_4687 0.80 -0.3 5,555,687 - Psyr_4687 0.80 -1.6 5,555,707 + Psyr_4687 0.82 -0.3 5,555,708 - Psyr_4687 0.82 -1.9 5,555,708 - Psyr_4687 0.82 -2.7 5,555,708 - Psyr_4687 0.82 -2.3 5,555,833 - -1.7 5,555,975 + -0.3 5,555,975 + +0.5 5,555,975 + -0.7 5,555,975 + -1.6 5,555,975 + +0.3 5,555,975 + -0.7 5,555,975 + -0.3 5,555,975 + -1.1 5,555,976 - -0.9 5,555,976 - -0.2 5,555,976 - -0.4 5,555,976 - -0.7 5,555,976 - +1.0 5,555,976 - +0.1 5,555,980 - -0.9 5,555,980 - -0.2 5,556,025 - +0.4 5,556,058 + +0.6 5,556,058 + +1.0 5,556,058 + -0.1 5,556,058 + -0.7 5,556,058 + -0.0 5,556,058 + -0.8 5,556,059 - +1.3 5,556,059 - +1.3 5,556,059 - -0.5 5,556,234 + Psyr_4688 0.33 -0.3 5,556,235 - Psyr_4688 0.33 +1.4 5,556,276 - Psyr_4688 0.39 -0.1 5,556,282 - Psyr_4688 0.40 -0.1 5,556,325 - Psyr_4688 0.45 -1.2 5,556,325 - Psyr_4688 0.45 -0.2 5,556,415 - Psyr_4688 0.58 -0.3 5,556,415 - Psyr_4688 0.58 +0.2 5,556,656 - -0.2 5,556,690 + -0.1 5,556,690 + -0.9 5,556,691 - +0.5 5,556,691 - -0.1 5,556,691 - +0.3 5,556,691 - -0.1 5,556,741 + -0.3 5,556,741 + -1.3 5,556,742 - +1.4 5,556,744 + -0.2 5,556,744 + +1.7 5,556,744 + -0.2 5,556,744 + +0.6 5,556,744 + +0.2 5,556,745 - +0.1 5,556,745 - -0.4 5,556,745 - +0.4 5,556,745 - +0.0 5,556,745 - -0.4 5,556,829 + +1.7 5,556,829 + +0.1 5,556,880 + -0.7 5,556,880 + -0.1
Or see this region's nucleotide sequence