Experiment: KB with Mexicanolide 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3805 and Psyr_3806 are separated by 665 nucleotides
Psyr_3805: Psyr_3805 - hypothetical protein, at 4,524,298 to 4,525,665
_3805
Psyr_3806: Psyr_3806 - hypothetical protein, at 4,526,331 to 4,526,816
_3806
Position (kb) 4526
4527 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4525.353 kb on + strand, within Psyr_3805 at 4525.371 kb on + strand, within Psyr_3805 at 4525.398 kb on + strand, within Psyr_3805 at 4525.623 kb on - strand at 4525.666 kb on + strand at 4525.694 kb on + strand at 4525.695 kb on - strand at 4525.783 kb on - strand at 4525.788 kb on - strand at 4525.792 kb on - strand at 4525.848 kb on + strand at 4525.852 kb on + strand at 4526.046 kb on + strand at 4526.076 kb on + strand at 4526.077 kb on - strand at 4526.112 kb on - strand at 4526.191 kb on - strand at 4526.198 kb on + strand at 4526.199 kb on - strand at 4526.208 kb on + strand at 4526.312 kb on + strand at 4526.313 kb on - strand at 4526.379 kb on + strand at 4526.420 kb on - strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.447 kb on + strand, within Psyr_3806 at 4526.448 kb on - strand, within Psyr_3806 at 4526.448 kb on - strand, within Psyr_3806 at 4526.448 kb on - strand, within Psyr_3806 at 4526.452 kb on - strand, within Psyr_3806 at 4526.564 kb on + strand, within Psyr_3806 at 4526.614 kb on + strand, within Psyr_3806 at 4526.699 kb on + strand, within Psyr_3806 at 4526.750 kb on - strand, within Psyr_3806 at 4526.754 kb on - strand, within Psyr_3806 at 4526.785 kb on - strand at 4526.988 kb on + strand at 4527.025 kb on + strand at 4527.025 kb on + strand at 4527.025 kb on + strand at 4527.026 kb on - strand at 4527.029 kb on + strand at 4527.030 kb on - strand at 4527.030 kb on - strand at 4527.030 kb on - strand at 4527.103 kb on - strand at 4527.103 kb on - strand at 4527.134 kb on - strand at 4527.218 kb on + strand at 4527.330 kb on + strand at 4527.330 kb on + strand at 4527.330 kb on + strand at 4527.330 kb on + strand at 4527.330 kb on + strand at 4527.330 kb on + strand at 4527.331 kb on - strand at 4527.331 kb on - strand at 4527.331 kb on - strand at 4527.331 kb on - strand at 4527.331 kb on - strand at 4527.381 kb on + strand at 4527.381 kb on + strand at 4527.382 kb on - strand at 4527.447 kb on - strand at 4527.527 kb on - strand at 4527.545 kb on - strand at 4527.545 kb on - strand at 4527.545 kb on - strand at 4527.623 kb on + strand at 4527.623 kb on + strand at 4527.644 kb on + strand at 4527.644 kb on + strand at 4527.645 kb on - strand at 4527.645 kb on - strand at 4527.645 kb on - strand at 4527.648 kb on - strand at 4527.749 kb on + strand at 4527.750 kb on - strand at 4527.764 kb on - strand at 4527.764 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mexicanolide 10 mM remove 4,525,353 + Psyr_3805 0.77 +0.6 4,525,371 + Psyr_3805 0.78 +0.0 4,525,398 + Psyr_3805 0.80 -2.7 4,525,623 - -0.9 4,525,666 + -0.2 4,525,694 + -0.1 4,525,695 - -0.3 4,525,783 - +0.4 4,525,788 - +1.1 4,525,792 - +0.2 4,525,848 + +1.1 4,525,852 + +0.3 4,526,046 + -1.9 4,526,076 + -0.9 4,526,077 - +0.3 4,526,112 - -0.6 4,526,191 - -1.2 4,526,198 + +0.4 4,526,199 - -1.7 4,526,208 + -1.3 4,526,312 + -0.4 4,526,313 - -3.3 4,526,379 + -2.4 4,526,420 - Psyr_3806 0.18 -0.8 4,526,447 + Psyr_3806 0.24 -1.5 4,526,447 + Psyr_3806 0.24 -1.2 4,526,447 + Psyr_3806 0.24 -0.6 4,526,447 + Psyr_3806 0.24 -0.4 4,526,447 + Psyr_3806 0.24 -1.3 4,526,448 - Psyr_3806 0.24 -2.1 4,526,448 - Psyr_3806 0.24 -0.7 4,526,448 - Psyr_3806 0.24 -2.2 4,526,452 - Psyr_3806 0.25 -0.4 4,526,564 + Psyr_3806 0.48 +0.9 4,526,614 + Psyr_3806 0.58 -2.9 4,526,699 + Psyr_3806 0.76 -0.7 4,526,750 - Psyr_3806 0.86 -2.7 4,526,754 - Psyr_3806 0.87 -0.9 4,526,785 - -0.6 4,526,988 + -0.5 4,527,025 + -0.1 4,527,025 + -0.2 4,527,025 + -0.4 4,527,026 - +0.3 4,527,029 + -0.8 4,527,030 - +0.6 4,527,030 - -1.1 4,527,030 - -2.7 4,527,103 - -1.7 4,527,103 - -1.0 4,527,134 - -0.4 4,527,218 + +1.4 4,527,330 + +0.9 4,527,330 + +1.0 4,527,330 + +0.1 4,527,330 + +0.2 4,527,330 + -0.1 4,527,330 + -0.8 4,527,331 - -0.6 4,527,331 - +0.1 4,527,331 - +0.1 4,527,331 - +0.4 4,527,331 - -1.3 4,527,381 + +0.7 4,527,381 + -2.2 4,527,382 - +0.8 4,527,447 - -2.2 4,527,527 - -1.0 4,527,545 - -2.3 4,527,545 - +0.8 4,527,545 - +0.0 4,527,623 + -1.2 4,527,623 + -0.6 4,527,644 + -0.2 4,527,644 + -1.6 4,527,645 - -2.2 4,527,645 - +1.1 4,527,645 - +0.5 4,527,648 - -1.3 4,527,749 + -1.2 4,527,750 - -0.6 4,527,764 - -1.6 4,527,764 - -0.9
Or see this region's nucleotide sequence