Experiment: KB with Mexicanolide 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2806 and Psyr_2807 overlap by 1 nucleotides Psyr_2807 and Psyr_2808 are separated by 90 nucleotides Psyr_2808 and Psyr_2809 overlap by 4 nucleotides Psyr_2809 and Psyr_2810 overlap by 14 nucleotides
Psyr_2806: Psyr_2806 - Bacteriophage Lambda NinG, at 3,384,124 to 3,384,708
_2806
Psyr_2807: Psyr_2807 - NinB, at 3,384,708 to 3,385,106
_2807
Psyr_2808: Psyr_2808 - hypothetical protein, at 3,385,197 to 3,385,478
_2808
Psyr_2809: Psyr_2809 - hypothetical protein, at 3,385,475 to 3,386,272
_2809
Psyr_2810: Psyr_2810 - hypothetical protein, at 3,386,259 to 3,387,236
_2810
Position (kb)
3385
3386 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3384.203 kb on + strand, within Psyr_2806 at 3384.203 kb on + strand, within Psyr_2806 at 3384.204 kb on - strand, within Psyr_2806 at 3384.204 kb on - strand, within Psyr_2806 at 3384.204 kb on - strand, within Psyr_2806 at 3384.331 kb on + strand, within Psyr_2806 at 3384.331 kb on + strand, within Psyr_2806 at 3384.332 kb on - strand, within Psyr_2806 at 3384.332 kb on - strand, within Psyr_2806 at 3384.332 kb on - strand, within Psyr_2806 at 3384.381 kb on - strand, within Psyr_2806 at 3385.021 kb on - strand, within Psyr_2807 at 3385.021 kb on - strand, within Psyr_2807 at 3385.083 kb on - strand at 3385.083 kb on - strand at 3385.301 kb on + strand, within Psyr_2808 at 3385.301 kb on + strand, within Psyr_2808 at 3385.302 kb on - strand, within Psyr_2808 at 3385.305 kb on - strand, within Psyr_2808 at 3385.734 kb on + strand, within Psyr_2809 at 3385.735 kb on - strand, within Psyr_2809 at 3385.735 kb on - strand, within Psyr_2809 at 3385.878 kb on + strand, within Psyr_2809 at 3385.879 kb on - strand, within Psyr_2809 at 3385.970 kb on - strand, within Psyr_2809 at 3386.142 kb on + strand, within Psyr_2809 at 3386.266 kb on + strand at 3386.266 kb on + strand at 3386.266 kb on + strand at 3386.267 kb on - strand at 3386.267 kb on - strand at 3386.267 kb on - strand at 3386.407 kb on + strand, within Psyr_2810
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Mexicanolide 10 mM remove 3,384,203 + Psyr_2806 0.14 +0.4 3,384,203 + Psyr_2806 0.14 +0.2 3,384,204 - Psyr_2806 0.14 +0.7 3,384,204 - Psyr_2806 0.14 +2.2 3,384,204 - Psyr_2806 0.14 +0.6 3,384,331 + Psyr_2806 0.35 +2.2 3,384,331 + Psyr_2806 0.35 +2.0 3,384,332 - Psyr_2806 0.36 -0.6 3,384,332 - Psyr_2806 0.36 +0.7 3,384,332 - Psyr_2806 0.36 -0.3 3,384,381 - Psyr_2806 0.44 +1.0 3,385,021 - Psyr_2807 0.78 -1.5 3,385,021 - Psyr_2807 0.78 -0.2 3,385,083 - +0.5 3,385,083 - +0.8 3,385,301 + Psyr_2808 0.37 -2.0 3,385,301 + Psyr_2808 0.37 -1.0 3,385,302 - Psyr_2808 0.37 +0.1 3,385,305 - Psyr_2808 0.38 +1.2 3,385,734 + Psyr_2809 0.32 +0.0 3,385,735 - Psyr_2809 0.33 -0.8 3,385,735 - Psyr_2809 0.33 -0.5 3,385,878 + Psyr_2809 0.51 +0.4 3,385,879 - Psyr_2809 0.51 +2.0 3,385,970 - Psyr_2809 0.62 +1.7 3,386,142 + Psyr_2809 0.84 -1.1 3,386,266 + -2.5 3,386,266 + -0.8 3,386,266 + -0.4 3,386,267 - -0.5 3,386,267 - -0.4 3,386,267 - -0.9 3,386,407 + Psyr_2810 0.15 +1.2
Or see this region's nucleotide sequence