Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28615

Experiment: Sucrose (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sucrose (C) and Ammonium chloride (N); with MOPS
6,366,155	+				+0.5
6,366,155	+				+1.4
6,366,155	+				+0.6
6,366,156	-				-1.7
6,366,156	-				+0.1
6,366,184	+				-0.8
6,366,184	+				-0.2
6,366,184	+				-1.0
6,366,184	+				+1.4
6,366,184	+				-1.9
6,366,184	+				+1.6
6,366,184	+				+0.2
6,366,185	-				+0.6
6,366,185	-				-1.1
6,366,185	-				-0.7
6,366,185	-				+0.2
6,366,185	-				+1.0
6,366,185	-				+0.2
6,366,185	-				-2.7
6,366,247	+				+0.7
6,366,247	+				-0.1
6,366,323	-				-2.0
6,366,323	-				+1.2
6,366,328	+				-0.6
6,366,328	+				-0.6
6,366,328	+				-0.0
6,366,328	+				-0.5
6,366,328	+				-0.3
6,366,328	+				+0.1
6,366,329	-				-0.6
6,366,329	-				+0.5
6,366,329	-				+0.6
6,366,407	+		PFLU_RS28610	0.19	+0.4
6,366,407	+		PFLU_RS28610	0.19	+0.4
6,366,407	+		PFLU_RS28610	0.19	-0.1
6,366,407	+		PFLU_RS28610	0.19	+0.5
6,366,407	+		PFLU_RS28610	0.19	-1.0
6,366,408	-		PFLU_RS28610	0.19	-0.5
6,366,408	-		PFLU_RS28610	0.19	+0.8
6,366,408	-		PFLU_RS28610	0.19	-2.2
6,366,408	-		PFLU_RS28610	0.19	-0.7
6,366,408	-		PFLU_RS28610	0.19	+0.4
6,366,478	+		PFLU_RS28610	0.27	-0.5
6,366,479	-		PFLU_RS28610	0.27	+0.6
6,366,646	-		PFLU_RS28610	0.46	+1.0
6,366,750	+		PFLU_RS28610	0.58	+0.2
6,366,808	+		PFLU_RS28610	0.65	+0.6
6,366,808	+		PFLU_RS28610	0.65	+1.6
6,366,808	+		PFLU_RS28610	0.65	-0.5
6,366,808	+		PFLU_RS28610	0.65	-0.7
6,366,808	+		PFLU_RS28610	0.65	-0.3
6,366,808	+		PFLU_RS28610	0.65	-0.3
6,366,808	+		PFLU_RS28610	0.65	-0.6
6,366,808	+		PFLU_RS28610	0.65	+0.2
6,366,808	+		PFLU_RS28610	0.65	-0.3
6,366,808	+		PFLU_RS28610	0.65	+0.5
6,366,808	+		PFLU_RS28610	0.65	+0.6
6,366,808	+		PFLU_RS28610	0.65	+0.8
6,366,808	+		PFLU_RS28610	0.65	-0.4
6,366,808	+		PFLU_RS28610	0.65	-0.6
6,366,808	+		PFLU_RS28610	0.65	-0.7
6,366,809	-		PFLU_RS28610	0.65	-0.9
6,366,809	-		PFLU_RS28610	0.65	-0.5
6,366,809	-		PFLU_RS28610	0.65	-1.2
6,366,809	-		PFLU_RS28610	0.65	+0.0
6,366,809	-		PFLU_RS28610	0.65	+0.7
6,366,809	-		PFLU_RS28610	0.65	-0.2
6,366,809	-		PFLU_RS28610	0.65	-1.2
6,366,809	-		PFLU_RS28610	0.65	+0.5
6,366,809	-		PFLU_RS28610	0.65	+0.9
6,366,809	-		PFLU_RS28610	0.65	+0.5
6,366,809	-		PFLU_RS28610	0.65	-1.1
6,366,809	-		PFLU_RS28610	0.65	+0.5
6,366,809	-		PFLU_RS28610	0.65	-1.0
6,366,811	+		PFLU_RS28610	0.65	+0.9
6,366,811	+		PFLU_RS28610	0.65	-0.4
6,366,811	+		PFLU_RS28610	0.65	+0.2
6,366,811	+		PFLU_RS28610	0.65	+0.5
6,366,812	-		PFLU_RS28610	0.66	-0.4
6,366,812	-		PFLU_RS28610	0.66	+0.9
6,366,812	-		PFLU_RS28610	0.66	+0.1
6,366,964	+		PFLU_RS28610	0.83	-1.1
6,366,964	+		PFLU_RS28610	0.83	-0.5
6,366,965	-		PFLU_RS28610	0.83	-0.7
6,367,058	+				-1.2
6,367,081	+				+2.5
6,367,081	+				+0.7
6,367,081	+				-0.6
6,367,081	+				+0.7
6,367,082	-				+0.3
6,367,082	-				-0.5
6,367,082	-				-0.2
6,367,082	-				-1.0
6,367,127	+				+0.3
6,367,127	+				-0.6
6,367,127	+				-2.6
6,367,127	+				-0.4
6,367,128	-				-0.9
6,367,128	-				+0.4
6,367,281	+				+0.3
6,367,348	+				-0.2
6,367,348	+				-1.7
6,367,348	+				-0.4
6,367,348	+				+0.4
6,367,348	+				-1.4
6,367,348	+				+0.2
6,367,349	-				-1.0
6,367,349	-				-0.3
6,367,349	-				-2.1
6,367,349	-				-1.6
6,367,349	-				-0.9
6,367,349	-				-1.3
6,367,475	+		PFLU_RS28615	0.15	-1.7
6,367,500	+		PFLU_RS28615	0.17	-0.3
6,367,802	+		PFLU_RS28615	0.30	-0.8
6,367,802	+		PFLU_RS28615	0.30	-1.4
6,367,802	+		PFLU_RS28615	0.30	-2.0
6,367,803	-		PFLU_RS28615	0.30	+0.8
6,367,803	-		PFLU_RS28615	0.30	+0.4
6,367,803	-		PFLU_RS28615	0.30	-1.4
6,367,884	+		PFLU_RS28615	0.34	-0.8
6,367,995	-		PFLU_RS28615	0.39	-1.9
6,368,051	+		PFLU_RS28615	0.41	-3.3
6,368,051	+		PFLU_RS28615	0.41	-0.9
6,368,052	-		PFLU_RS28615	0.41	+0.1
6,368,052	-		PFLU_RS28615	0.41	-1.1
6,368,052	-		PFLU_RS28615	0.41	-0.3
6,368,063	+		PFLU_RS28615	0.42	-1.5
6,368,063	+		PFLU_RS28615	0.42	-1.5
6,368,064	-		PFLU_RS28615	0.42	-0.3
6,368,064	-		PFLU_RS28615	0.42	-1.4
6,368,064	-		PFLU_RS28615	0.42	+0.5
6,368,064	-		PFLU_RS28615	0.42	-0.0
6,368,079	-		PFLU_RS28615	0.42	+0.8
6,368,079	-		PFLU_RS28615	0.42	-2.0
6,368,079	-		PFLU_RS28615	0.42	-2.5
6,368,201	+		PFLU_RS28615	0.48	-0.6
6,368,201	+		PFLU_RS28615	0.48	-0.8
6,368,201	+		PFLU_RS28615	0.48	-2.0
6,368,201	+		PFLU_RS28615	0.48	-1.6
6,368,201	+		PFLU_RS28615	0.48	-1.5
6,368,201	+		PFLU_RS28615	0.48	-0.8
6,368,202	-		PFLU_RS28615	0.48	+0.2
6,368,202	-		PFLU_RS28615	0.48	-1.6
6,368,202	-		PFLU_RS28615	0.48	+0.4
6,368,202	-		PFLU_RS28615	0.48	-1.6
6,368,202	-		PFLU_RS28615	0.48	-2.3
6,368,202	-		PFLU_RS28615	0.48	-2.0
6,368,229	+		PFLU_RS28615	0.49	-1.9
6,368,229	+		PFLU_RS28615	0.49	-1.3
6,368,229	+		PFLU_RS28615	0.49	-0.4
6,368,229	+		PFLU_RS28615	0.49	-1.3
6,368,230	-		PFLU_RS28615	0.49	-0.2
6,368,286	-		PFLU_RS28615	0.51	-1.0
6,368,400	+		PFLU_RS28615	0.57	-1.7
6,368,400	+		PFLU_RS28615	0.57	-0.4
6,368,400	+		PFLU_RS28615	0.57	-3.3
6,368,400	+		PFLU_RS28615	0.57	+2.0
6,368,400	+		PFLU_RS28615	0.57	+0.6
6,368,400	+		PFLU_RS28615	0.57	-1.9
6,368,400	+		PFLU_RS28615	0.57	-0.6
6,368,400	+		PFLU_RS28615	0.57	-1.0
6,368,400	+		PFLU_RS28615	0.57	-0.9
6,368,400	+		PFLU_RS28615	0.57	-0.8
6,368,400	+		PFLU_RS28615	0.57	+0.2
6,368,400	+		PFLU_RS28615	0.57	-1.4
6,368,400	+		PFLU_RS28615	0.57	-1.2
6,368,400	+		PFLU_RS28615	0.57	-0.0
6,368,401	-		PFLU_RS28615	0.57	-0.6
6,368,401	-		PFLU_RS28615	0.57	-3.1
6,368,401	-		PFLU_RS28615	0.57	-1.0
6,368,401	-		PFLU_RS28615	0.57	-1.5
6,368,401	-		PFLU_RS28615	0.57	-1.5
6,368,401	-		PFLU_RS28615	0.57	-1.9
6,368,401	-		PFLU_RS28615	0.57	-2.7
6,368,401	-		PFLU_RS28615	0.57	-0.9
6,368,401	-		PFLU_RS28615	0.57	+0.5
6,368,401	-		PFLU_RS28615	0.57	-0.6
6,368,401	-		PFLU_RS28615	0.57	-1.9
6,368,401	-		PFLU_RS28615	0.57	-0.8
6,368,401	-		PFLU_RS28615	0.57	-1.6
6,368,402	+		PFLU_RS28615	0.57	+0.5
6,368,402	+		PFLU_RS28615	0.57	-1.2
6,368,403	-		PFLU_RS28615	0.57	-2.0
6,368,403	-		PFLU_RS28615	0.57	-1.6
6,368,403	-		PFLU_RS28615	0.57	-0.9
6,368,403	-		PFLU_RS28615	0.57	-2.1
6,368,446	-		PFLU_RS28615	0.59	-2.2
6,368,581	+		PFLU_RS28615	0.65	-0.7
6,368,582	-		PFLU_RS28615	0.65	-1.6
6,368,582	-		PFLU_RS28615	0.65	+0.2
6,368,674	-		PFLU_RS28615	0.69	-1.8
6,368,718	+		PFLU_RS28615	0.71	+0.1
6,368,719	-		PFLU_RS28615	0.71	-2.3
6,368,719	-		PFLU_RS28615	0.71	-2.2
6,368,785	-		PFLU_RS28615	0.74	-1.5
6,368,843	+		PFLU_RS28615	0.76	+0.5
6,368,843	+		PFLU_RS28615	0.76	-1.2
6,368,844	-		PFLU_RS28615	0.76	-1.1
6,368,844	-		PFLU_RS28615	0.76	-1.5
6,369,392	+				+0.7
6,369,393	-				+0.1
6,369,412	+				-0.1
6,369,413	-				-0.4
6,369,413	-				+2.3
6,369,431	-				+0.3
6,369,432	+				+0.1
6,369,432	+				-0.7
6,369,433	-				+2.2
6,369,433	-				-1.3
6,369,433	-				+0.3
6,369,518	+		PFLU_RS28620	0.12	+0.3
6,369,518	+		PFLU_RS28620	0.12	+0.4
6,369,521	+		PFLU_RS28620	0.13	-1.5
6,369,522	-		PFLU_RS28620	0.13	+0.6
6,369,522	-		PFLU_RS28620	0.13	+0.7
6,369,522	-		PFLU_RS28620	0.13	-1.6
6,369,569	+		PFLU_RS28620	0.24	+1.0
6,369,569	+		PFLU_RS28620	0.24	-1.1
6,369,570	-		PFLU_RS28620	0.24	-1.2
6,369,570	-		PFLU_RS28620	0.24	-0.4
6,369,578	+		PFLU_RS28620	0.26	-2.3
6,369,578	+		PFLU_RS28620	0.26	-0.3
6,369,578	+		PFLU_RS28620	0.26	+0.3
6,369,578	+		PFLU_RS28620	0.26	-0.9
6,369,578	+		PFLU_RS28620	0.26	+1.2
6,369,578	+		PFLU_RS28620	0.26	-0.9
6,369,578	+		PFLU_RS28620	0.26	-0.5
6,369,578	+		PFLU_RS28620	0.26	-1.2
6,369,578	+		PFLU_RS28620	0.26	-0.4
6,369,579	-		PFLU_RS28620	0.26	+0.7
6,369,579	-		PFLU_RS28620	0.26	+0.9
6,369,579	-		PFLU_RS28620	0.26	-0.4
6,369,579	-		PFLU_RS28620	0.26	+0.8
6,369,579	-		PFLU_RS28620	0.26	+0.2
6,369,579	-		PFLU_RS28620	0.26	-0.8
6,369,579	-		PFLU_RS28620	0.26	-0.4
6,369,579	-		PFLU_RS28620	0.26	+0.2
6,369,579	-		PFLU_RS28620	0.26	+0.6
6,369,610	+		PFLU_RS28620	0.33	+1.3
6,369,670	-		PFLU_RS28620	0.47	+0.7
6,369,702	+		PFLU_RS28620	0.54	+1.5
6,369,702	+		PFLU_RS28620	0.54	-0.1
6,369,703	-		PFLU_RS28620	0.54	+0.9
6,369,703	-		PFLU_RS28620	0.54	+1.3
6,369,703	-		PFLU_RS28620	0.54	+0.1
6,369,703	-		PFLU_RS28620	0.54	-1.3
6,369,724	+		PFLU_RS28620	0.59	-0.2
6,369,724	+		PFLU_RS28620	0.59	+0.9
6,369,725	-		PFLU_RS28620	0.59	+0.2
6,369,725	-		PFLU_RS28620	0.59	-0.0
6,369,725	-		PFLU_RS28620	0.59	+0.0
6,369,725	-		PFLU_RS28620	0.59	+1.3
6,369,902	+				-0.2
6,369,902	+				-0.8
6,369,902	+				-1.7
6,369,903	-				-0.9
6,369,903	-				-1.7
6,369,949	+				-0.5
6,369,976	-				+0.2
6,369,976	-				-2.0
6,369,976	-				+0.6
6,369,976	-				-0.2
6,369,976	-				+1.0
6,369,976	-				+0.7
6,369,976	-				+1.2
6,370,017	+				-0.9
6,370,017	+				-0.4
6,370,017	+				-0.2
6,370,034	+				+1.3
6,370,034	+				-0.5
6,370,035	-				+1.3
6,370,035	-				+0.7
6,370,035	-				+0.1
6,370,035	-				-0.5
6,370,035	-				-1.2
6,370,035	-				+0.9
6,370,035	-				-1.7