Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27730 and BWI76_RS27735 are separated by 209 nucleotides BWI76_RS27735 and BWI76_RS27740 are separated by 20 nucleotides
BWI76_RS27730: BWI76_RS27730 - ISNCY family transposase, at 5,754,980 to 5,755,933
_RS27730
BWI76_RS27735: BWI76_RS27735 - hypothetical protein, at 5,756,143 to 5,756,436
_RS27735
BWI76_RS27740: BWI76_RS27740 - LacI family transcriptional regulator, at 5,756,457 to 5,757,398
_RS27740
Position (kb) 5756
5757 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5755.231 kb on + strand, within BWI76_RS27730 at 5755.239 kb on - strand, within BWI76_RS27730 at 5755.290 kb on - strand, within BWI76_RS27730 at 5755.295 kb on - strand, within BWI76_RS27730 at 5755.315 kb on + strand, within BWI76_RS27730 at 5755.434 kb on - strand, within BWI76_RS27730 at 5755.539 kb on + strand, within BWI76_RS27730 at 5755.568 kb on - strand, within BWI76_RS27730 at 5755.671 kb on + strand, within BWI76_RS27730 at 5755.676 kb on + strand, within BWI76_RS27730 at 5755.684 kb on - strand, within BWI76_RS27730 at 5755.701 kb on + strand, within BWI76_RS27730 at 5755.741 kb on - strand, within BWI76_RS27730 at 5755.771 kb on + strand, within BWI76_RS27730 at 5755.789 kb on - strand, within BWI76_RS27730 at 5755.807 kb on - strand, within BWI76_RS27730 at 5755.809 kb on + strand, within BWI76_RS27730 at 5755.875 kb on + strand at 5755.993 kb on + strand at 5756.050 kb on + strand at 5756.180 kb on + strand, within BWI76_RS27735 at 5756.190 kb on + strand, within BWI76_RS27735 at 5756.207 kb on - strand, within BWI76_RS27735 at 5756.345 kb on - strand, within BWI76_RS27735 at 5756.420 kb on - strand at 5756.504 kb on + strand at 5756.597 kb on + strand, within BWI76_RS27740 at 5756.597 kb on + strand, within BWI76_RS27740 at 5756.597 kb on + strand, within BWI76_RS27740 at 5756.605 kb on - strand, within BWI76_RS27740 at 5756.605 kb on - strand, within BWI76_RS27740 at 5756.702 kb on + strand, within BWI76_RS27740 at 5756.728 kb on + strand, within BWI76_RS27740 at 5756.873 kb on - strand, within BWI76_RS27740 at 5756.897 kb on + strand, within BWI76_RS27740 at 5756.897 kb on + strand, within BWI76_RS27740 at 5756.952 kb on - strand, within BWI76_RS27740 at 5756.960 kb on + strand, within BWI76_RS27740 at 5756.993 kb on + strand, within BWI76_RS27740 at 5756.993 kb on + strand, within BWI76_RS27740 at 5757.001 kb on - strand, within BWI76_RS27740 at 5757.066 kb on + strand, within BWI76_RS27740 at 5757.092 kb on - strand, within BWI76_RS27740 at 5757.105 kb on - strand, within BWI76_RS27740 at 5757.187 kb on + strand, within BWI76_RS27740 at 5757.338 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 5,755,231 + BWI76_RS27730 0.26 -0.1 5,755,239 - BWI76_RS27730 0.27 +0.5 5,755,290 - BWI76_RS27730 0.32 -2.8 5,755,295 - BWI76_RS27730 0.33 +0.0 5,755,315 + BWI76_RS27730 0.35 +0.7 5,755,434 - BWI76_RS27730 0.48 +0.1 5,755,539 + BWI76_RS27730 0.59 -1.0 5,755,568 - BWI76_RS27730 0.62 -1.6 5,755,671 + BWI76_RS27730 0.72 -1.3 5,755,676 + BWI76_RS27730 0.73 -1.4 5,755,684 - BWI76_RS27730 0.74 +0.2 5,755,701 + BWI76_RS27730 0.76 -0.3 5,755,741 - BWI76_RS27730 0.80 +0.3 5,755,771 + BWI76_RS27730 0.83 -0.1 5,755,789 - BWI76_RS27730 0.85 +0.1 5,755,807 - BWI76_RS27730 0.87 +0.3 5,755,809 + BWI76_RS27730 0.87 +0.3 5,755,875 + +1.2 5,755,993 + +1.0 5,756,050 + +0.1 5,756,180 + BWI76_RS27735 0.13 -2.4 5,756,190 + BWI76_RS27735 0.16 +0.0 5,756,207 - BWI76_RS27735 0.22 -1.2 5,756,345 - BWI76_RS27735 0.69 -2.4 5,756,420 - -0.4 5,756,504 + +0.3 5,756,597 + BWI76_RS27740 0.15 -1.3 5,756,597 + BWI76_RS27740 0.15 -1.0 5,756,597 + BWI76_RS27740 0.15 -0.1 5,756,605 - BWI76_RS27740 0.16 +0.5 5,756,605 - BWI76_RS27740 0.16 -0.6 5,756,702 + BWI76_RS27740 0.26 +0.0 5,756,728 + BWI76_RS27740 0.29 +0.5 5,756,873 - BWI76_RS27740 0.44 -1.2 5,756,897 + BWI76_RS27740 0.47 +1.0 5,756,897 + BWI76_RS27740 0.47 -0.1 5,756,952 - BWI76_RS27740 0.53 -0.0 5,756,960 + BWI76_RS27740 0.53 +0.4 5,756,993 + BWI76_RS27740 0.57 +0.4 5,756,993 + BWI76_RS27740 0.57 -1.6 5,757,001 - BWI76_RS27740 0.58 +0.1 5,757,066 + BWI76_RS27740 0.65 +1.0 5,757,092 - BWI76_RS27740 0.67 +0.3 5,757,105 - BWI76_RS27740 0.69 -0.1 5,757,187 + BWI76_RS27740 0.77 -0.1 5,757,338 - -0.8
Or see this region's nucleotide sequence