Experiment: 2'-Deoxycytidine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS20905 and BWI76_RS20910 are separated by 153 nucleotides BWI76_RS20910 and BWI76_RS20915 are separated by 3 nucleotides BWI76_RS20915 and BWI76_RS20920 are separated by 78 nucleotides
BWI76_RS20905: BWI76_RS20905 - 4-hydroxy-tetrahydrodipicolinate synthase, at 4,371,468 to 4,372,346
_RS20905
BWI76_RS20910: BWI76_RS20910 - glycine cleavage system transcriptional repressor, at 4,372,500 to 4,373,069
_RS20910
BWI76_RS20915: BWI76_RS20915 - peroxiredoxin, at 4,373,073 to 4,373,543
_RS20915
BWI76_RS20920: BWI76_RS20920 - AI-2E family transporter, at 4,373,622 to 4,374,689
_RS20920
Position (kb)
4372
4373
4374 Strain fitness (log2 ratio)
-2
-1
0
1 at 4372.500 kb on - strand at 4372.526 kb on + strand at 4372.537 kb on + strand at 4372.538 kb on + strand at 4372.686 kb on - strand, within BWI76_RS20910 at 4372.701 kb on - strand, within BWI76_RS20910 at 4372.706 kb on + strand at 4372.951 kb on - strand, within BWI76_RS20910 at 4372.991 kb on + strand, within BWI76_RS20910 at 4372.997 kb on - strand, within BWI76_RS20910 at 4373.057 kb on + strand at 4373.106 kb on + strand at 4373.204 kb on + strand, within BWI76_RS20915 at 4373.212 kb on + strand, within BWI76_RS20915 at 4373.212 kb on + strand, within BWI76_RS20915 at 4373.217 kb on - strand, within BWI76_RS20915 at 4373.219 kb on + strand, within BWI76_RS20915 at 4373.220 kb on - strand, within BWI76_RS20915 at 4373.222 kb on - strand, within BWI76_RS20915 at 4373.417 kb on - strand, within BWI76_RS20915 at 4373.514 kb on + strand at 4373.790 kb on - strand, within BWI76_RS20920 at 4373.883 kb on - strand, within BWI76_RS20920 at 4373.969 kb on + strand, within BWI76_RS20920 at 4374.001 kb on - strand, within BWI76_RS20920
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxycytidine 5 mM (C) remove 4,372,500 - -2.0 4,372,526 + -1.4 4,372,537 + -0.7 4,372,538 + -1.7 4,372,686 - BWI76_RS20910 0.33 -1.6 4,372,701 - BWI76_RS20910 0.35 -1.2 4,372,706 + -0.1 4,372,951 - BWI76_RS20910 0.79 -1.3 4,372,991 + BWI76_RS20910 0.86 -0.8 4,372,997 - BWI76_RS20910 0.87 -1.3 4,373,057 + -1.1 4,373,106 + +0.5 4,373,204 + BWI76_RS20915 0.28 -0.4 4,373,212 + BWI76_RS20915 0.30 -0.9 4,373,212 + BWI76_RS20915 0.30 +0.1 4,373,217 - BWI76_RS20915 0.31 -1.8 4,373,219 + BWI76_RS20915 0.31 -0.5 4,373,220 - BWI76_RS20915 0.31 -0.3 4,373,222 - BWI76_RS20915 0.32 -0.4 4,373,417 - BWI76_RS20915 0.73 +1.2 4,373,514 + -0.5 4,373,790 - BWI76_RS20920 0.16 +0.3 4,373,883 - BWI76_RS20920 0.24 +1.3 4,373,969 + BWI76_RS20920 0.32 -0.6 4,374,001 - BWI76_RS20920 0.35 +0.3
Or see this region's nucleotide sequence